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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25065_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		pre-mRNA-splicing_factor_RBM22_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0000974 C Prp19 complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0033120 P positive regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043009 P chordate embryonic development
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046872 F metal ion binding
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071007 C U2-type catalytic step 2 spliceosome
Transcript
Level		FPKM:9.30 TPM:4.84
ORF EntryO_BomoMSG15159_complete:A_BomoMSG_c25065_g1_i1
Sequence
(Nucleotide)
GTTCGTTCAGAGTGAAAATCTGTCATTACAAAATGAATGTTCAATGACGTACCTTGGTAA
CTAAATACTTTTGTGATTTAGTTGCATGTAGAAATGGGAAAGAAGTGTTTTGTTTGATAG
GTTAAGCTGCGTTGAATCTAAAATAATATCAAGAAAGGACACGCCATGGCTACATCGAAG
TCAACAAACACATACAATCGTCAGAATTGGGAAGACGCCGATTTTCCAATATTGTGCCAA
ACATGTCTTGGAGATAACCCTTACATTAGAATGACTAAAGAAAAATACGGTAAAGAATGT
AAAATATGCTCAAGACCTTTCACAGTGTTTCGATGGTGTCCCGGAGCAAGAATGCGTTTC
AAGAAAACAGAAATATGTCAGACCTGTTCGAAACTGAAAAATGTTTGTCAAACATGTTTA
TTGGATTTGGAATATGGTCTGCCAATCCAAGTGAGAGATGCTGCATTAAAAGTTCAGGAT
GACCTACCTCGAAACGAAGTAAACAAGGAATATTACATACAAAACTTGGAGAGTCAGCTG
TCTAACTCTGATCCAACACAGCCAACCAATTCTCTAAAATCTAAAGGATCGTCCGATTTG
TTGGTGCGGTTAGCTAGAACAGCTCCATATTATAAGAGGAATAGACCGCACGTGTGCTCG
TTTTGGGTCAAAGGAGAATGTAGACGAGGGGAAGAATGTCCGTATCGTCACGAGAAGCCA
ACAGATCCTGATGATCCACTAGCTGATCAGAACATTAAAGACAGGTATTATGGTGTAAAT
GATCCAGTAGCTGAGAAGCTTATGCGTCGTGCTGCTGCAATGCCTGCTCTACCTCCACCT
GAAGACAAAACTGTTACTACCTTGTATGTTGGTAATCTTCCTGATAATGTCACTGAGGAC
GAGCTTAGAGGCCACTTTTACCAATATGGTGAAATTAGGTAAGTTTGACAAGTTAACACA
ACAAATAACAATGCTCTGGAAACAAACAGTTCATAGAAATAAACTCATAATTGTGTCTGG
(1020 bp)

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