SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25029_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_paired_box_protein_Pax-6-like_isoform_X1_[Papilio_polytes]
Ontology
GO:0001708 P cell fate specification
GO:0001822 P kidney development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007422 P peripheral nervous system development
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0021549 P cerebellum development
GO:0021588 P cerebellum formation
GO:0021703 P locus ceruleus development
GO:0030154 P cell differentiation
GO:0030878 P thyroid gland development
GO:0030901 P midbrain development
GO:0030902 P hindbrain development
GO:0030917 P midbrain-hindbrain boundary development
GO:0034672 P anterior/posterior pattern specification involved in pronephros development
GO:0035775 P pronephric glomerulus morphogenesis
GO:0043049 P otic placode formation
GO:0043565 F sequence-specific DNA binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048793 P pronephros development
GO:0060113 P inner ear receptor cell differentiation
GO:0060118 P vestibular receptor cell development
GO:0072114 P pronephros morphogenesis
Transcript
Level		FPKM:7.53 TPM:3.92
ORF EntryO_BomoMSG15057_3prime_partial:A_BomoMSG_c25029_g1_i1
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTGGGCGCGCCGGCACAACAAGCGCGCTCTTCAGTGTTCTGGCT
GAGCTTCAAGCGAGCGCGTGCGAACCGAGTGCTATCCGATAAATTGTCGCATCGTAACTA
TCTTATCATACGAATGAAGTTATTCATACGAATTTAGAACTGCAACTGTGTATTGCTTTG
AGTGGACTTTGTCGGTGCCGTATGTTGAGCTTCCAGGGAGATCGCAATAGGAAGGTGGCC
CGACCATGTTGATATCGGCGGGCAGTGGCCCCACGCCCGAGTTTTCCCCCGTCTCGTGCT
GCGCGTCCTGGAAAATGGAATCAGCGCCTCCTGCGCCCGCGGCAATCACACAACCTTTGA
ACATATCCACTAATGTACCAGTATCTCCGTCATCATCGACGGGAGGTGCCGGCGGCGGAT
CCGGGACCCCTCTCTACCCTGGCGCAGCGTCTCATCCCCTGTCTTCATTACTGTCACAGC
AACGGCTTCTAGAGCTTTCCAGATTCGGCTTAAGGCATTATGATATCGCCCACCATGTTT
TGTCTCAACAAGGTGCTGTCACGAAGTTGCTTGGTACATTACGGCCGCCGGGTCTTATAG
GAGGTAGCAAGCCGAAAGTTGCTACACCCGCTGTAGTATCCAAGATTGAGCAGTACAAAC
GAGAAAACCCCACAATATTCGCATGGGAAATACGCGAACGGCTTATATCTGAAGGTGTTT
GCACAAACGCAACGGCGCCGAGCGTCTCGTCAATTAACAGAATACTAAGGAACCGGGCGG
CCGAACGAGCTGCCGCTGAATTCGCCAGGGCAGCGGGCTATGGGCTTTACGCTGCCCCAC
CTCCGTATGGAGCATTTCCGTGGGCTGGTGGCGGAGGTGTGTGGCCTCCTGGGACTTTGT
CACTTCCACCCGGAGTTCCAGGACCACCAACCGGAGTACCGCACCCCGACGTTGTACAAC
AAGGATATTTGTCATCAGGACGAGGACTTATAGATGTGGACGGAGACGATTCGGGGTCCC
TTGATGGTGAACAGCCAAAGTTTAGGAGAAATCGTACGACTTTCAGTCAAGACCAATTAG
AAGAGCTGGAAAAAGAGTTCGAAAAGTCACATTATCCTTGCGTTTCAACGCGAGAACGAC
TGGCTTCGAAAACGTCGTTATCGGAAGCACGGGTTCAGGTTTGGTTTTCCAACAGACGAG
CAAAGTGGAGGCGCCACCAGCGCATGAACCTCCTGAAGCGCGGTGGCGGCTCCTCCCCCC
GCCACCCCGCC
(1271 bp)

- SilkBase 1999-2023 -