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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25025_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0002092 P positive regulation of receptor internalization
GO:0003383 P apical constriction
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0007163 P establishment or maintenance of cell polarity
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032970 P regulation of actin filament-based process
GO:0033269 C internode region of axon
GO:0043219 C lateral loop
GO:0043220 C Schmidt-Lanterman incisure
GO:0043234 C protein-containing complex
GO:0044319 P wound healing, spreading of cells
GO:0045177 C apical part of cell
GO:0051301 P cell division
GO:0051642 P centrosome localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
Transcript
Level		FPKM:0.84 TPM:0.44
ORF EntryO_BomoMSG15049_complete:A_BomoMSG_c25025_g1_i1
Sequence
(Nucleotide)
TGCTCTTCCGATCTGCAGAAGCTGGCGCTGGGCCAGAAAATGGTCGAGTTTCCAGTATAG
TGAACGCGATCAATCAGAATAACCCCAACAGCTCAATGAGAGGCAGGATACCGAAGAGCT
CTTCCAAAGATGATCTATTGAGTAAAGAGCAGACTCCGGATAGTGCGCTACAAGACGCTT
TAAATACTTCTTCGGGCTCTATATTAGGTTTAAGAAATCGCCTAATACTTCGACTTGATG
TGCCGGTTCATGACTCCGAGAAGGCCGGGCTGGGTATTAGCGTTAAAGGCAAAGTGACTG
TTGGACCAGACCCACAAGACTTGGGTATATTCATCAAATCAGTATTAAACGGCGGAGCTG
CATCTCGAGACGGAAGATTACATACGAACGATCAGCTCCTGAGTGTGAATGGCGTGTCGT
TGGTGGGTCAGTCCAACGCTGAGGCGATGGAGACACTGCGAAGGGCGTTGCTGCACGCCC
GGCCGCAGAGGAGTGGCAGTATATCTCTTACTATCGCCAGGAGAACAGAAAGTATGGACA
GCCTGGCGAGGTGGAAAGACGACACTCCACCGAACGGCAACGACACGACCAGCTCCAACG
ACAACTCGCAGAACTTCAACACCGTCATATACACGTCCAGCGACAAGGAGAACAAGCCTA
CCGACAACCACAACTACGACGCCAACAAGAACGAGGCCTTCGATAGCCACGAAGCAAGAA
CCGGCCCCAAAAAACACGCTTCCATAGTCACCATAAACAACAACAGCAGCTGGGTCTCAA
ACCAATCCGATGACACTAAAGGGTATTTAGAGAGAGATAAGGATGTACCTCACGACGCCA
AAAGGGATAGTTTCGAGTGGAGTCGGCTTGATGGATGGAACCCAGTGATCGATAGATTGA
CGGGACTAAGAAACGAGAGCTATTACATGGCAACCCAGGTCGATGTTCCGCAAATGAATG
GACATCATTATAGACAGAATCTAGGACACGTACATATGTCTCGATCGCCGCCGGCTCATC
ACAACGTTATCATTGAAGAGGACTATGGTACGACGAGGGGCAGCGGCGGCGGCGAGTCCG
GCAGCGAGTGCGGAGCCGCGGCGGGCTTCAGTCGGGACGCCGTGGGGCGCCGCTCCATGT
CCGAGAAGCGACACGCCGCCATGGACGCCAAGCAGACCGGCACCTACAAGAAGATCAAAG
AAATCAAGGCCATCCATTCAATGCAAGTTGGTCCCGCACTCGGTATGAGGAAGTCTTCCA
GCTTGGAATCACTCCAGATAGCTATACAAGAAAACCAAAGGAATCCCAGAAATGAACCTA
TTTATGCGCGAGCGCACCCACCGTTAAAGCACTGGTTGACTGACGACAACGCCGGCCCGG
ATATCATCAGAGGATCGCCTCAACAATCTTCACTGTCGCACAAGAAACCGTCGCTACTCA
AGTCCTTATCGACAATGTTCAGAATAGGGAAGCCCCACAAGAAGACTGAAGGCGAGTGCG
GGCGCTCGCAGCCCGGCCGCGCCTCCGAGAAGTCGCTCTCTAGGGACGCGCTCGACCGAC
ACAATCGGCTCGACGAGCGGCCTGAAGACAACACGCAACAACAAACCTCTAGGACGGAGA
CGTCTCATTCGCGGCAGAGCAGCGGCAGCGGGGACCGAAACCAGCGTCGCCAC
(1673 bp)

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