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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25018_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		Cycle_like_factor_b_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003053 P circadian regulation of heart rate
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0032922 P circadian regulation of gene expression
GO:0042594 P response to starvation
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048148 P behavioral response to cocaine
GO:0048511 P rhythmic process
Transcript
Level		FPKM:4.19 TPM:2.18
ORF EntryO_BomoMSG15025_3prime_partial:A_BomoMSG_c25018_g1_i2
Sequence
(Nucleotide)
TGATATGTTGACAGACACGAAAGTAACATCGGATAATTTGGAAATTTATTTTATTTTAAT
TAATATTTAAAATTCCGTACCATTCAACCGGTTCGTCGGTATTTGTATCTGTAAATCAAA
GGGATATTGTGCTTAGATTATCAAAAAACATAACTCGAGTGCTAGTGTTAAAGAGTATTG
ACTGTTGCGGAACAAGGGCAAATTCGTGAAGTTTCCATGGTCTTATACGAGGAATGGCCG
ATTTTATCGACGAGGCTAGTACATCACAACGTGGACATGCGAACCCGAGTGCGATACAGG
CGTATGAGATGACACCGGAAGGGGGCGTGGGGTTGGGCGGCGCGTGCGCCGACTCGGCCG
GCGCCCTCATCACCCCGCACCCTCCCCTTCATCATCCAGTGCCGCAGACCTCACAGCAAC
TCCATCATGATCCGCGGAAAACAAAACCCAATCACTACGTTCCTGAAAACTATGAGATAT
CGGCGTGCGACTCGCAGCGCCAGTCTCCACACGGACACACGCCGCGGACTCGGACCAACA
GTACTCGTAAACGGAAACCATCGTCCTATGGAACTGGAAGCGCTTATGATGACGACGAAG
AAGATTCAAGATCCACAACAACTACAACCACGGCGACCACGCGCGGCACTCCCGACAAGA
AACAAAATCATAGCGAGATCGAAAAACGGCGACGTGATAAAATGAACACTTTTATATCGG
AACTGAGCGCCATGATACCGATGTGCGGAGCCATGGCTCGGAAGCTGGACAAGCTGACAG
TCCTCCGCATGGCCGTTCAACACTTGAGGACGGTGCGCGGCGCGCTCTCGGCCTGCCCCT
TGACGGCCCGGCCCTGTCCCACTTACCTCACTGAGCGAGAACTAAACGCACTGATACTCC
AGGCGGCTCACGACTGCTTTTTGCTCGTCGTGCGATGCGATCGCGGCAGGTTACTTTACG
TCTCGGCTTCGGTCAAAAATATACTTCATTACGATCAATCGGAACTATTAGGCCAGAGCC
TGTTCGACATTTTACATCCAAAGGACGTCGCTAAAGTAAAGGAACAACTATCATCGTCAG
ACCTTAGTCCACGAGAAAGACTCATCGACGCAAAAACGATGTTGCCATTGAAAGCGGACG
TAGTAGCCGGCGCGTCCAGGTTCGGTCCGGGGGCACGTCGGTCGTTCTTCTGTCGGATCA
AGTGCAAATTAGACACAGAAGAAGTCGAAACTCCCCCGCAGCCAGTCAAGGAGGAGGTGG
AGCCAGTGGCCAAGATGCGGAAGAAACACTCTCACGAGAAAAAATACTGCGTCGTGCAAT
GCACAGGTTATTTAAAATCGTGGGCGCCAACGAAGATGTGTGACGGTGCCAGTGCGGAAG
GGGGAGAGGAGAGTGAAGCGTGCAACATGTCGTGTCTAGTGGCAGTGGGCCGAACCTTGG
GTGGTTTAGCTCCCACCACGAACTCTCCGACATCCATGCCTCAAACCAGACACCTGCAAT
ACGTCTCACGACACACTACCGACGGGAAATTCTTGTTTGTTGATCAGCGGGTGACTCTCG
CGCTAGGATTCTTGCCCCAGGAGTTGCTGGGCACTAGTCTGTACGAGTACGTGCACGGGC
CGGAGCTGGGCGCCGTGGCCCGCACGCACAAGGCCGCGCTGCTGCAGCGCGACGCGCTCC
ACACCCCGCCCTACTGCTTCCGCAGGAAGAACGGCTCGATGGCCAGAATACAAACCCACT
TCAAACCGTTCAAAAATCCGTGGACGAAAGACGTCGAGTGCTTAGTGGCCAACAACACCG
TCGTGTCGGAGTCCCAGGTGTCGCTGCAGCAAGACACGACGCAAGCAGCGTTTGATATTT
ACAAGCAAAAATCGGACGTCGAGATGCAGCGCCTCATAGACTCGCAAGTCGAGTCCCATA
AGATCGGCAGCGCCATCGCCGAGGAGGCTCTGCGGCGGTCGTCGACTGATTACTCGCCCG
ACCTGCCGACCGAGTTGCTGCAAGACGCCGTCTTCAATCAGCAGTTTTCTCCGCTGCAAG
TTGCGCTAGTGGACAACATCCTCGGGACCGACAGTAGCACTTCAAATCAGGTTCGCAACA
ACGTGCCCCTGAGTTCAGTGAGCTCCATCAGCCCGCCGGCGCCGTCGGTGGAAGAGACGA
CTCTGTGCGACACCCCCCCGCCGCCTTCCCCCCCG
(2195 bp)

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