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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24916_g1_i3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:42.96 TPM:22.35
ORF EntryO_BomoMSG14741_complete:A_BomoMSG_c24916_g1_i3
Sequence
(Nucleotide)
CAAATACGTATTAGCAATGGCGACGGCATAGTTGTACGATAACTGCGTAGCTGATTTATT
TTATATTGTGTGTAACCAATTTGACTTATCATTGGCGTCCTCACGCCTAACAACGGGGCC
TTATAACCCCACAAATTTACACCGGAAGAAGTATTGATTTCTCCGTTAGCAAGATGATGA
TGTATACGGGAACTAGTACAGAGCAGGACACCCGCTTCAGTGACAAGGAGAAGAAGCTGA
TGAAGCAAATGAAGTTTGGAGATTGCCTCACTCAGCAGGTTGACATGTCAAAAGTGAAGC
TCGACGTGCTGAAGCCGTGGATCACTCAAAAGATAACAGAAATTCTAAACATGGAAGATG
ATGTTGTCATTGAATATGTCACCAACCAGCTTGAAGAAAAGTTCCCATGCCCAAAGAAAA
TGCAGATCAACTTGACTGGATTCCTAAATGGAAAGAACGCACGCCTTTTCATGGGAGAGT
TATGGGAGCTGTTGCTGAGCGCGCAGGCCAGTGAAAACGGTATACCCGAATCATTTACTC
AGCAGAAGAAAGAAGAAATAAAGAAGAGAATGGAGGAGCAGCAGAACAAGGACAAAGACA
AGGAGCGACGGAGATCGAGGTCCCGGTCGCGTTCCCGGCGCCGCTCTCGCGACCGACGGC
GCTCGCGAACTCGTTCTCGTGATCGTTCCAGTGACAGAAAGCATCGTAACGGCGGAAGTC
CGCGTCGATCGAGACGGCGCAGCAGCCCGATCAGAGACAAGGTCAGCCCTGCGAAAACTG
AACCGGAAACCAAAGCTCCAAGTGTAGCAGAGAACGGTAAGTCACCAGAAAAGAATGAAG
AAGAGGTTAAAGAAGAACCAGTTCAGAATAATTCTCCAACTGTCAATGAACCTGTCAATG
ATGAAAACAAGGAACCAACCATAACACAGAACGTTGAAGAGAAATCTGAAGTTGAAGGTC
AGAAATCTAGATCTGTGTCACCTGCTAAGTCAACGGACGAGAAAGAGAAAACCAATGATG
AGAAACCTGCTGATAAGTCGCGCCGATCATCTAGCGAAAGACGCTCGTCTTCAGCTTCAT
CCCGTGGCAGTGTGAAGAAGAGATCGTCACATAAAAAACGACAATACCGTTCGAATCGTG
ATTCTTCTACAAGTGTTAGCCCTAGGCGCAGCTCCCGAAGAGAAAGGAGTAAATCTCGCC
GTAGGAGCAGCCGACGTAGGTCGTTAGATCGTCGTGAGAGGGAAAGAGAACGGGAGAGAG
AAAGAGAACGCGAACGTGAAAGAGAGCGACGACGCCGTGAACGAGAACGGCGTGAGAGGT
CGAGAGAACGTCGACGATCGCTTGAAAGACGCAGACGGTCGCGTTCACGCTCTCGACGAC
GTTCAAGAGACAGGTCTCGAGACCGTCGCCGCTCCCGTTCACGTCGCAGGTCGCGGTCGA
GGCGTCGCTCAGGACGCAGGTCACGCGACCGACGCTCACGTGATCGCCGCTCCAAAGACC
GCCGCTCACGAGATAAGTCCAGAGAGCGGAAATCGCGCGATCGCTCCAGGAGATCCAGGG
ACAGGAAATCTCGCGATAGAAGGTCTAGCGATATTATCAAGGAGCGTTTAGAGAAATCTG
TCTCGATTCCGAGAAAAGAAAATAATGACAAATTACCCAAAAAGCCTGAGCACCTGCCTA
TTCCGCGTGAGCAATCTAAAGAGCGCATTATATCTAGCACAAGCCGAGAATCATCAGTAG
CTGTTGAAAAACCCCCACCAGAACCTTTTAATGACGGAAAAACCCAGTCAGACCACACTG
ACGACGAAGAGAAAGAAGATATTGTAAATATTCCAAACCTGCGTGAATACTCAAAAAGTC
TTTCACGCACTCCATCACCGTTCTTGCGAAGACATGAAATTGACAAAAATAAGAAATCTG
ATGAAGTTTCGGGAAAAGAGCAGAATGAGGACGAAATAAAAACCAAGGAATCCAAAAGAG
CTAAACGTAAAGCCCATCAATCAGATTCTGAAAGTGCGAGTAGCGAGGAGCTATCGAAAT
CCAAAAGTAAGTCCAAAATCAAGCGTAAGGAGAAGGGTACATCTAAGAGAAATAAGAAAC
TCAAAAAAGAGAGCTCTTCTAGCGATAGCGATTCTGAGGAATCTTCTTCTAGTGAATCTG
AAGAAGATAGGAAGAAGAAAAGCAAAAAGAATGCTAAAAAGAAGTTGGCCAAGAAATCAA
GAAAGAAAAGAGCTCGCTCGTCGAGCTCCGACTCCAGTTCGGAAGAAGAAGTTAAACACA
AGGCTTCAAAGACAAAACAAAAAAATGTCGTCGACGAATCTGATGTTGATAAGAAGTCTA
AAAAACGCGCCAAGGATGCGAGTAGCGAAAGGTCAAGGTCTGAGAAAGTTGAAAACAAGC
TCAAGTCCAAAAAAGTCGATTCTGAGGATTCCCAAGATGATAGTTCGGATACTGATGCAA
AATCTAAGAAGAAAAACCCTAAACGTGATACTTCTAGTTCAGAAAAAGACCCAAAACGCG
GTAAAAAAACTGACTCTATTAAGGAAAAAGCCTTATCACCAGAAGTTGCTAAATTAAAGA
AAGTAGAGGATAAACCAGCAAAAGTGAAAGTAGACGATGCTAAACCTAAATCTCGTGACG
AAAACGAGAAAAAACCTAAAAAGAGGGAAAAGGAAGAGTCCTCTTCTGAAAGTGACCAGG
TGTCAAAGAAGAAAGCAAGGAAGAAGGTAACAGACTCAGAGTCAGATTCAGACAGTGATG
AACCTAAGAAATCCAAGAAAAATAAGAAACATAAGAAGCATTCTAAAAAGCATAAGAAAC
ACAAGAAGCATAAGAAATCATCAAAGAAAAAAGAGGATTCTTCTGATAGCGATGAAGCCG
AGGAAGAAGAGGAAGAAGGAAAAGTTAATAACGAAGATTTGGAAAAGAAACTGAGAGAGA
GAGCATTGAAGTCGATGAAGAAACAAACTAGTGTTTCTGGATCCGATTAGTGTTCGGTTT
TTTTTCTATTTGACTTCTAAGAAAAATTTCATTGAACGTACAGC
(3044 bp)

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