SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24915_g12_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_STT3B_isoform_X2_[Bombyx_mori]
Ontology
GO:0004576 F oligosaccharyl transferase activity
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006516 P glycoprotein catabolic process
GO:0006986 P response to unfolded protein
GO:0008250 C oligosaccharyltransferase complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0043686 P co-translational protein modification
GO:0043687 P post-translational protein modification
Transcript
Level		FPKM:66.88 TPM:34.79
ORF EntryO_BomoMSG14732_complete:A_BomoMSG_c24915_g12_i1
Sequence
(Nucleotide)
GACGTGTCCGTCCCGTCAGTTAGCCAAAAAGTCAATCCACTTCGGAATTGAATTGTTGGG
ACTGATGTATGAAAATACTAGTTTAGTGAATATTTAGAAAATTTATTAATACTTCTGGGG
AGTAGGATGCCGTCCACTACTGAGACCCTTCCCAGTAATGGGCGCAGCAAGGGGCTATTT
CAAAATACGGCGGGTTTGAGTACGCTCATCACTGTAACTGTCCTGACACTGGCTTGGTTG
GCCGGTTTCGCATCCCGGCTTTTCGCTGTGATACGTTTTGAAAGTATAATTCATGAATTC
GATCCTTGGTTCAACTACCGGTCTACAGCGTATATGGTTCAGCACGGTTTCTATAATTTT
TTGAACTGGTTCGATGAGCGTGCTTGGTACCCACTGGGACGTATCGTGGGGGGTACGGTG
TATCCTGGTCTAATGATCACTTCAGGCACTATACATTGGATACTGCATGCTCTCAACATA
CCCATTCATATCCGAGACATATGTGTATTCCTTGCCCCAGTATTCAGTGGGCTCACAGCA
ATTGCAACGTACTTATTGACTTCTGAACTATGGTCGCGTGGAGCTGGGCTATTTGCTGCC
TGTTTCATAGCTATAGTGCCAGGTTACAGCAGTAGATCCGTTGCTGGGAGCTACGATAAT
GAAGGAATTGCTATATTTGCATTGCAATTCACATATTACTTGTGGCTGAAAAGTGTTAAA
AGTGGGTCCGTATTCTGGTCTATTTGCACTGCATTGTCATATTTTTACATGGTTTCAGCA
TGGGGCGGATACGTATTCATTATCAATTTGATACCTCTTCACGTCTTTGTTCTTCTAATA
ATGGGACGTTTCTCGCAGCGTCTTTTCGTCAGCTACTCAGTTTTCTACATTATTGGCTTA
TTGCTGTCCATGCAGATTCCCTTTGTTGGGTTTCAACCAATACGTACCAGTGAACATATG
GCAGCGTCAGGTGTGTTTGCATTGTTGATGGCCATCGGAGCCCTAAAGTACCTGCACAGT
CTGAACCCTAAAGGACAATGGAAACAACTGCTAATCTTGGGCGGTATGCTGGCCGCGGGA
CTCGTGTTCCTGGCTGTGGTGCTCCTCACATACATGGGAGTCATTGCACCTTGGAGTGGA
AGGTTTTATTCACTCTGGGACACGGCATACGCAAAGATTCACATTCCGATCATAGCGTCC
GTATCCGAGCACCAGCCGACGACGTGGTCTTCATTTTTCTTCGATCTGCACGTGCTCGTG
TGCACGTTCCCGGTCGGTCTGTGGTACTGCATCAAGAATGTGAATGATGAGAGAGTTTTC
GTTGCTCTGTATGCCCTGAGTGCGGTGTATTTCGCCGGTGTGATGGTTCGTTTGATGTTG
ACCCTGACGCCCGTAGTGTGCGTGCTAGCCGGCATTGCCTTTTCCATTCTTCTAGACTTG
GCCTTAAGAGAGGACGAAGTGCCTGAACAATCCCCGGACAGTGAAGAATCTAAGAGTCTC
TATGATAAAGCCGGCAAGGTAAAGAAGCGCACACTTGAGGCCGCGCCGAATGCGGACACC
GGCCTGGGCATGAACGTGCGCTCGGGAACGCTCATAGCCTTCATGATCCTGCTGATGTTG
TTCTCTGTGCACTGCACCTGGGCCACGTCTAACGCTTACTCCAGCCCTAGCATCGTTCTG
GCCAGCTACGGCAATGACGGGTCGCGTAAAATCTTAGATGACTTCCGAGAAGCCTACGGT
TGGTTATCGCAGAATACAGCAGAAGACGCAAGGATTATGTCTTGGTGGGACTACGGGTAT
CAGATAGCGGGGATGGGTAACAGAACAACCCTGGTGGACAATAACACCTGGAACAACTCC
CACATAGCACTGGTCGGGAAGGCGATGGCGAGCAACGAATCCGCTGCCTACAGCATCATG
ACGATGCTGGACGTTGATTACGTGCTCGTTATATTCGGGGGCGCGATCGGGTACTCCGGA
GACGACATCAACAAGTTCATATGGATGGTCAGGATCGCTGAGGGGGAACATCCTAAGGAC
ATACACGAAGTTGACTATTTTACTGAAAGAGGAGAATACAGGATCGACTCTGAAGGATCA
AAAACTATGTTGAACTGTTTGATGTACAAACTCTCGTATTATAGGTACGACAGTGGGGGA
AGCCCTCCCGGGTACGACCGTACGCGCAGTGCGCTGCCCGGGAACAGAGGGTTCAAACTT
ACCTACCTCGAGGAAGCCTACACCACCGAGCACTGGCTCGTCAGGATATACAGGGTGAAA
AAGCCATCTGAGTTCAATCGTCCGCGTTTGTCACTAGCAAAAAGGAAAATTTCAACAAGC
AATACTATTTCTAAGAAGACTTCAAGAAGAAGAAAAGGCGCATTGAAGAACAAACCTACA
GTCGTGAAGGGAAAAAAGGTCGGTAAACTGGAGTGACACGGTCCGGCGACACCAGCGCCC
CCACATGAGCGCGCGGCGCAAATAATCTCATATCAGTGGTAAAACTGCAAGTTTTTTGTA
CTGTGTAATATTAGTTAAGTGTACGATTTCGTATTTCGCAGATTTTTTTTTATCGGCTCG
TGCTTACCACCAACTCTTATCACGTCACTCTTGAATTCTAGAAGCTTCTTGTGAGCTTCG
GAAAATATACTGCTTTTGTTTATGTTTTTGGTTTGCTATAAAATTAATCAAAATCGTGTT
CGCGAGTTTTTTAACCGACTTCGCAAAACGAGGAGGTTCTCAAGTCGAGTGTATTTTTTT
ATATGTTGTAACTCAGAACTTTTTTTAGGTGAACCCATTTGGATTTTGAACCGATTTCGT
TTCTTCTAATTGAAAGTTGGTGCAGAAAATTTAAATTGGACCAGTGCGCTTAGTGCGAGT
TTTTTAACGGTCTCGATAGCGTAAAAGTTAATCCAAC
(2917 bp)

- SilkBase 1999-2023 -