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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24900_g1_i3
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		DNA_mismatch_repair_protein_Msh2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0030983 F mismatched DNA binding
GO:0032300 C mismatch repair complex
GO:0032301 C MutSalpha complex
Transcript
Level		FPKM:3.20 TPM:1.66
ORF EntryO_BomoMSG14675_3prime_partial:A_BomoMSG_c24900_g1_i3
Sequence
(Nucleotide)
CGAAAATCCCTGGTTCGTGGTTAATTAATATATTAATGAATTTAATGATACACTTAAAAC
ATATGAACCGAGTTGACAATTTTATTAGAAAATCTGTCGTAGTTTTCGGCATTGTATAGA
TTCAAAATACTATACTAAGATATTATGCGTATACTGTAAATAATAAATTGGTTATTGTTT
TATAAACTCGCTTACTATAATAAATACAATTCTGAGGATGTCTTCTTTACAACCTATACA
TGCCTTGAACTTAGATTCTGTGCAACAGCAGGCGTTTGTGAATTTTTTTAATTCTCTTCC
TGACAAGCCACCGACGACCGTGCGTGTATTTGACCGCAATGACTACTACAGCATTCACGG
TATTGACGCGACCACTGCAGCCCGGGAGGTCTTTTCGTCCGTGGCCAACATAAAACGTAT
GGGAGTGGAACCTAACCGCCTCGATTACTTAGTACTTTCAAAGGGAAACTTTGAAATTCT
CATTAAGAAACTGTTATTGGTGAGACGTTACAGAGTCGAAATATACGTTGCCGATGGATC
AATAAAAGGCTGCGATTGGTCACTCAAGTACAAAGGCTCACCGGGATATCTGACGCAATT
AGAAGAAGTGCTTGGCGAAGGTTTAGGCGGTTCGGACGAGAACACGCCATGCTTGATGGC
GGTTAATATAAAAACCGACCCGGTTTCAAAGGGTAAGCTCCTGGGAGTGGCTTGCGTCGT
CGCTGCTGACTATCAAATGTCGGTCTCAGAATTCACCGACGACGATCTGCTGACACAACT
TGAAACAATAACCGTCCAAACGGCGCCTTCGGAATGTCTTATACCGTTCTCTGATAATGA
TGACTACAAAGCTTTGAAGAAAGTAATGGATCGCACCAACGTGACCGTAACGAAACTGAA
GAGAGTCGACTTCTCGACCGAAGGTCTCGTGCAGGACCTGAACAGATTGTTAAACTTCAA
GGAAGATCAACAGCAGGACGCTAACGCCTTCCCGGAGACGAGGAAAGACTTGGCCATGAC
TAGTTTAGCGGCCACGATAAAGTACAGTGCTTTACTAAACGAAAGTACGAACTTCGGCAG
ATTTCGTCTGTCCACAATACGAACGGACTGCTTCCTACACTTGGACGCGGCGGCGCTGAC
GGCTCTCAACATACTACCGGAGCTGGGCGACAATTCGAACTCGCCTTCTAGAAGCTTGTT
CGGTTTACTGGACAGGTGTCGGACTCAGCACGGCAAAAGGTTGCTGGCTCAATGGCTGCG
ACAGCCGCTCCGCGACATTAACCTAATCAACGAGCGGCTAGACGTTGTGGAACTGCTCAT
GAACAACTCCCAGCTGAGGCTTCAATTGCACGAGGACCACTTGCGGCGCATACCGGACCT
ACAGGCCCTGACCAGACGACTGGCCAGAAAGAAAGCTAATTTACATGACTGCTATAAGAT
ATATCAGGCAATCAAGAGGTTACCGTCTTTGTTACAATGTCTGACTGAAGCAGAAAATAC
GACAGTGCATTCGTCACTCACTGAGCCCATCTCGGAGCTGAACGATGACCTCGACAAGTT
CCAGCAAATGATAGAAGCTACACTTGACATGGGTGCTGTAGAAAGAGGCGATTTCCTAGT
TAAGCCCTCCTTCGACGAACAACTGCAGAGTCTGAACGAACAACTGGAACGTTTGCAGTC
GTCTGCGGAGAGGGAGCTGGGGAAGGCCGCGAGGGACTTGGGACTCGATGCAGGCAAAAC
TATTAAACTAGAAAATAATACGCAGAATGGATTTTGTTTCAGGATTACTCTGAAAGAAGA
ACGAAATTTACGAGGCGATAAGAAATATAAAATAATCGACGCCGTCAAAAGCGGTGTTAG
ATTCAGAACGAATACATTGGAATCAATTAATGAAGAGTACACGCAAGCCAAGACCGACTA
CGAGAAAGAACAAGATAAAGTCGTTAAAGAAATCGTCAGTATAGCTGGTGGATATTCAGA
ATGTTTGTTCTGTCTATCTCACATACTGTCGCGTCTAGACGTCTTGGTGTCTTTCGCTGT
TGCCGCTTCATCAGCTCCGTACCCGTACTGCAGGCCCGTGGTCACGGAGTCCATCGACGA
ACTCATCCTGAAGGATGTGAGGCATCCGTGTCTGGAGGTGCAGGAGGGCGTGTCCTATAT
ACCAAACGACGTAGAATTTAAAAGAGGCTCGGTG
(2194 bp)

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