SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24846_g2_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
Transcript
Level		FPKM:2.83 TPM:1.47
ORF EntryO_BomoMSG14531_3prime_partial:A_BomoMSG_c24846_g2_i1
Sequence
(Nucleotide)
TCTGTATTCTGAAGTATCTGGAGTTTTAAATTTTGCCAGCTGGGCGGTTCCAATATTTAT
TTTATTTATGAAAAGAAAATAATTGTTTTACGAATTAATATCGGAGTCTCAGTTCCCGGA
AGCTGTGAAGAATCAAATTATTTAATAAATTTAGTGTTATGCTGATACTTAATGACCGAT
CGGGCTTCAACTGAAAAATCTCCGGAGCTCAATCCAAACGCAGGAGTGCTGAGGTGCTGG
CGTGTTCGCGCGTGTCTGGTGCAGAAAAGAGCGCACGCGGAGGCGGGGCGGAGGGCGAGA
GGAAGTGTCTATATGGCAGATCCGGAGTCATCATGAAGGTGGATGCCGACGCTACAGACG
CGCCCGCCGCGCAGACCGCTGCCTCCGCAACACCGACCGCTAGTAATACCGAATCGCCTG
TCTCATCTCTCGACGACTGCCGAATCCCGACAAGTGAAACTATCCCGACGCCCGACCGGG
CGCTTCTCGCCAAGCTGGAGGAAGAAAACCGTCGTATCGAGGCTGATGCGAAGAACGCCT
CGCTCACTACCGTCCACAGTCGGAAGAGCTCCGACACATCACTGATATCCCTCGCTTCCG
CCACAAGCTCAAGTCATGAGGTCGAAACGCGCCCAACTCCTGGGACTAATGGAGAAGAGG
ATCTTTGGAGCCTCTGGGGTCGCCTCGTCAGCAACTGGGAATCGGAATGGAAACGTCGAA
ACCAATGGGTCCGCGACCTTGTTCGACAGGGTGTCCCACATCATTTCAGAGGCATCGTAT
GGCAGCTACTGGCAGGCGTAGACACGTCGCCCGAAAAGAAGTTATACGCCTCATATATTA
AGGCGAAATCAGCCTGCGAGAAGGTCATACGTCGTGACATCGCTCGCACATATCCCG
(897 bp)

- SilkBase 1999-2023 -