SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24794_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101745170_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0046778 P modification by virus of host mRNA processing
GO:0046872 F metal ion binding
Transcript
Level		FPKM:10.74 TPM:5.59
ORF EntryO_BomoMSG14437_5prime_partial:A_BomoMSG_c24794_g1_i1
Sequence
(Nucleotide)
CGTCTAATGTCTACTGAACAGATTACAACAAACAATAAACAAGTTTTATTATTAATTAAT
AAGTTCATTTGTACCAGAAAATGAACGCTCTTTTGGATTATGGAACATCTTCCAGTAGTA
GCAGTGATGAATGTGACGAGACAGAAGAATCTACTACAGAGACTCCGAAGCAGAAATTAC
CAAAACCAAGCTTGGGAGAAAGCACTATTCAAACATCAGTCTTTTCCAATCCTTTTGTGG
CAGCTGAGCAAGCGAAAGCAGCGATCCTAGAAAAACATGTGAAAATGGTTCCAGGTAAAG
ATGGAATGCAGACTATAAATGGAAGGAAGATATGTTGGAATCACAGAAAAGGAAGATGTC
GGTTTGGACATAACTGTAAATATGCACATGACACTGATATACAGAAGACACCAGAAGAAT
TAGAGGCTGAGAAACAGCAATACAAGTCAGTTATTTTTGAAGGGGCAGGCACAATGACAG
CAGCACCGCCTCCTGAAGCAACACTGGATCCAGTATCTAATACAGATGATGTAATATGGG
AAGGTGGAGTCAATAAAAAGAAACTCAAGCGTCCTGGATTAAGTAAAAACTTAATACCCA
ATAAAAAAGTTATCAAAATGTACAAAGAACAGAAAGCTAGGGATGGAAAAAAAATATAAT
TTATTAGTTTTATAAAAAAAAAAA
(684 bp)

- SilkBase 1999-2023 -