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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24781_g1_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_35_isoform_X1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006624 P vacuolar protein processing
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030904 C retromer complex
GO:0031647 P regulation of protein stability
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045056 P transcytosis
GO:0061357 P positive regulation of Wnt protein secretion
GO:0070062 C extracellular exosome
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0097422 C tubular endosome
GO:0097481 C postsynaptic density
GO:1902823 P negative regulation of late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:3.60 TPM:1.87
ORF EntryO_BomoMSG14404_complete:A_BomoMSG_c24781_g1_i1
Sequence
(Nucleotide)
GATCTGCTCATTGACTGATTGTTAACGCCTACGAATTTTCGTCGAATTTGCAAAAAAACC
TTATCTGGTTTTTCAATTGCATCGGATTAGTTACTCAGGTGCGTTACTAAATGCGTACAG
CTCAATATCATCGTTAAAAACGACAAATGGCGGGAATAGGCCACCCATTTCTGTATGTTT
GGTCAACAGCCCAAATGACAAACCAGGTGTCTCCAGTCGAAGAGCAGGAGAAACTCCTGG
AGGAGGCCTTGAACATTGTTAAAGTTCAGGCATTTCAAATGAAAAGATGTCTCGACAAAT
CTAAATTAATGGACGCCCTGAAACATGCATCAACAATGCTGGGTGAATTGAGAACTTCAC
TGTTATCACCAAAGAGCTATTATGAGCTTTATATGGCAATAACAGATGAACTGCGTCACC
TGGAGCTGTATCTTCTGGAGGAGTTCCAAAAGGGAAGGAAGGTTGCAGATCTTTATGAAC
TGGTCCAATATGCTGGGAACATTGTACCTAGATTGTACCTGTTAATCACAGTAGGACTGG
TCTACATCAAAACAAACACGAATCTGCGAAGAGATCTATTGAAGGATCTGGTTGAGATGT
GTCGCGGAGTTCAGCATCCTTTGAGAGGACTTTTCCTTAGGAATTACCTATTGCAGTGCA
CAAGGAACGTTTTACCGGACACACACGAAGCCCCAAATGAAAACGAGGGAACTGTACGAG
ATGCTGTTGATTTTGTCCTGATGAATTTCGCCGAAATGAACAAGCTGTGGGTCAGGATGC
AGCACCAGGGACACTCAAGAGATAAAGAGCGCCGCGAACGAGAACGCTCAGAGCTTCGTA
TATTAGTTGGTACGAATTTGGTTCGACTGTCGCAACTGGAGTCCGTCACGGTGGAGGACT
ACCGCAGGATGGTGCTGCCCGGCATCTTGGAGCAGGTCGTGAGCTGCAGGGACGCCATAG
CGCAGGAGTACCTCATGGAGTGTATCATACAGGTGTTCCCGGACGAGTTCCACCTGGCCA
ACTTACAGCCGTTCCTCAAGTCGTGTGCTGAACTCCAACCCGGAGTCAACATCAAGAACA
TCATCATAGCACTGATCGAGAGGCTCGCTTCGTATAGCCAGAGGAATGAAGGCAATATGA
ATCTAAGCGTGGTCCTGGAAGATGGACAAGAACAAGAAGTCCAACTGTTCGAAGTTTTCT
CTGATCAAGTTGCTGCGATAACCCAGAGCAGGGTCGACATGCCCCAAGAAGACATGCTGA
GCCTCCAACTCGCTCTGCTCAAGCTAGCTCAGCGATGTCACCCGGACAAGCTGAACTATG
TGGACCGGGTTCTAGCTCACACAGACAAGATCTGCACTGACATACACCAGTCCAGCGGTC
AGTCGACGTTGGAGCACCACACGCCAGTCTTCAAGGAACTGATGAAGATCATCAAGCTGC
CCTGCGACCACTACAAGAACATACTGGTGCTGATTAAGTTGTCCAATTACGCGCCGCTGA
TACGACATCTCAGCTACCAGGGTCGGGTGATGATAGCCGTCCACCTCATCAACGACGTGC
TGGAGACCAACACCGCAATATCCACTCCGCAAGATGTCGAAGCTGTCCTCGGTCTCTTGG
ATGTGCTGGTGAAGGATCAGCCGGATCAGCCGCCTTCTGAAAGCGACGTTGAAGACTTCG
TGGAAGAACAGGGCTTGTTGGCCAGACTTATTCATCATTTCAAATCGGACTCCGCCGACC
AGCAGTATCTGATAACCAGCACAGCGAGGAAGATCCTTCAGGGCGGCGGAGCGAGGAGGA
TCCAGCACACGTTCCCGCCGTTGGTGTTCCACGCGTACCGTCTGGCGTTCGTTTATAAGG
ACCTCAAAGACCAGGACGAGATGTGGGAGAAGAAATGCCAGAAGATATTCCAGTTCTGTC
ACCAGACCATCACCATGCTCGTGAAGGCGGAACTGGCTGAACTCCCTCTAAGGTTGTACC
TCCAGGGAGCTTTGGCGATAAGCGAAATAGGATTTGCCAATCATGAAACGATAGCTTACG
AGTTCCTGTCGCAAGCTTTCTCGCTGTATGAAGACGAGATATCCGACAGCAAAGCGCAAC
TGGCCGCAATAACATTGATAATAGCCACCTTCGAGCAGATCAATTGTTTTGGCGCTGAGA
ACGCGGAGCCGATGCGGACCCAGTGCGCGCTGGCGGCCAGCAAGCTGCTGAAGAAGCCGG
ACCAGAGCAGGGCCGTGGCGCTCTGCTCGCATCTCTTCTGGAAGGGGACCAGGGACGGCC
GCCCGGTGTGGGCGCTGAACGACGCGTCCCGCGCGCTGGACTGCCTGAAGAAGGCGGCCC
GCGTGGCCCAGCAGTGCATGGACGGCGGCGTGCAGGCGCAGCTGCTGGCCGAGCTGCTGG
GCCGATACGCGCTGCTGCGGGAGCGCGGCAACCAGAGTCTCACGCCCAGCCTCATCGACG
CGATAATACAGAAAATACGCGAGGAGCTGGCCAACTTAGATCAGTCCGAAGAAGTGGAGC
AGATCACGAAACACTTCCACAACACTTTGCAGCATCTGAAGAACAGGATCGAGTCTCCGG
ACCCCGAGAGTCTGGGCTACGAGGGTCTCACGCTGTCCTAACCCTGGGAGGTCCGGTACT
TGTTCTTGTCAATCTATCGTAATGACGTAGTTTGGAGTGTTAGCACTCGTGAACACACTA
TACTAGCGATATAGAGCGTCAAAGGCTCACGTGAGTACCCTTCAACTACTAGTATCTAAT
AAACATCATCAAGATGTATTAATGAAATGATAAAATAAATATAACATTTATATAGAGAAA
TGAAGAACAAATATATTA
(2838 bp)

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