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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24749_g2_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		mRNA_transport_regulator_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
Transcript
Level		FPKM:17.13 TPM:8.91
ORF EntryO_BomoMSG14311_complete:A_BomoMSG_c24749_g2_i1
Sequence
(Nucleotide)
CATCCCATATCATTTCATTTCATGCCATGTTTCATATTAATCAACTTCATTTCATTTCAT
AATAGATGAAAAACAAACTACTTATTTATTGAGGTTATGTTGTGACATTATAAATTAGTA
TCAAACAAGTAAATAATCATGCCGCTAGATTTTCGAAGATTTAATGGTCCAGAAGATAGT
GTATCATATAAAATATATACTAAAGACTACTTGAAAACATACGACGAACAATTAAAAGAT
CTGTATGATGAAAACGGGAAAAGAAAAGATGGACGTGAGCTAAATGAAGCTCGCAGCATG
TGTATGTTTTTTGCCAGAACTGACATGGTTTCACAAGCAAAGGGTTCAGCATATGTGGAG
TTAAGGAAAACTAAAGTTGTATGCTCTGTATTTGATCCTAGGGAGATACCACATCAAAAT
GAATTCCGTCAGCTTGGCCAGTTATATTGTGAAGTGAAATTTGCACCGTTTTCATGCCCG
AGGAAACGTCGACCATATGTTCCTGATGTAGAAGAGAAAGCCTTGTCTGTTGCTTTACGG
CAGGCTCTTGAACCGGCTGTCTGTAGGCACTTCTTCCCAAACTATCAGATTGATGTTTTA
ATATACATCTTAGAACATGACGGGTCATGTTTAGCAGCTGCTATCAATGCAGCAGGACTT
GCTCTAGCTAATGCCGCCGTTCCAATGTTTGATATAATCACATCATGCTCTGTAGCAGTC
ATAGGCAACAAAATGTTCATTGACCCCACTGAAATAGAAGAACATATAGCAAAGAACAGC
ACAGAAGTAAACCACGGAATTATAACAATGTCAGTGTTATCACAGTTAAAACAGATTTCA
GATTTCACACAAATCGGTTCTATGGATGTTGAGTGTGTCACAAAAGTAATGGAAGTTTTA
TTAAAAGAATGTGAAATAATAGTTCCGAATATACAAAGAGTTCTAGTTGTGGATGTTGTA
AAGAATTTTGAATTGAAAAAACACTTAGAAGCAGAAACAAAGAAACGGGAAGAGATTTTG
AAAAAGAAAATGGACGAATGGAGATCTTTATTAAATGGTCAATGAATACTAAAAAAAAAA
(1080 bp)

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