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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24715_g1_i1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		nuclear_pore_complex_protein_Nup107_[Bombyx_mori]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005813 C centrosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
Transcript
Level		FPKM:6.77 TPM:3.52
ORF EntryO_BomoMSG14227_5prime_partial:A_BomoMSG_c24715_g1_i1
Sequence
(Nucleotide)
AAATTCATTAGAATGGCTAGAAAATGCTAATGAGAGGTTTATTCGATTTTTAGCACATCT
CATATTAGTATTGAGACAAATGGGTAAAGATCCTCAGCATGATGTTGGTGACCAAGTCTT
GGAAAAGTATGTGACATTACTTACCATTAGATTGGTTGATGGATCTGTGGAGTCCCCAGA
GCTTATAGCATATTACACTTCTACAGTTCCAGCCGAAAAACAAATCATTCTGTATGCAAA
CTTTATGGACCAAATTCACAAAAGTGATTATAGGCAAGGTGTTGTAAAAGCTGGGTTGGA
TGCTGGAATCGATGTTGGTGCATCAGCTCGCGTGGCTATTAAGAAAGCTATTGCAGATAT
ACAACAAGGATATGGAAATGTAGAATTGAACTTCACACAGACAAGTGTTATAGAAAAGGA
TAAAACATTGATATCCAAAGTTATTTCTTCTTTAGAATGGTTGGCTTTAGTTGACAATCA
GCTTGAAGAAGCACTATGGTTGAATAATGCAATGATCAGAACATTTATATTCATTGGAAA
CACTGATGCTGCCAATGCATGTCTGACTAGCTTCAACAAAATGTTTTCTAACTTTATAAA
CACAGTTGATTCAAGTACCTCTGAACTAAGAGAACATTTGTGTTTAAAAGCATACTTGGA
TGCTCTCGAGGGATTTGCAACTTGGTATAGACATTTTATAAGTGGACAACCTAAAGATGT
GCAGCCATTACCACCAGATGCAACATTTTCTGATAAAGTATATCATGAACAGCAATGTGC
ACAAGTTGAAAAGAAGAAAGCAATATGGATTAATGCAGTTTCACATCAATCAAGACATAC
CAAAAGCTTACTATACAATGTTTTACTGTTTCCAGGAGGTTGGTTGCAAGATGAGAGTGA
TAGTACATCATCAGACAATTTCAACCAGGAAGAGAAAACAGAAAGATTAAAACAGTTGGA
CACCCTTAGACGACTTTGTGTGCCAGAAATTGTGATTTTATTACTAAAGATTTTACAGAG
TAATGAGGATATTGAGAGTCACAAGGAAGCCATTAAATTGGGCAACTTAATTGCTGCAGA
AAATAGAGCTCTATATCAAGTGTTCAACAGAAGTAAGCTGATGGAGATTTTGGAGAGGAT
CAAGGAGTCATCTCTGTTCCTTATGGAAAAAGGAACAGACATTTTAGGTTTTGAAATAAG
GGAATAAAAATTTAAAATTGTAATATTTTATTTAATAAAAATAAATCAAGTTCAGAAAAA
AAAG
(1264 bp)

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