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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24707_g1_i3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		integrin_alpha-PS2_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030239 P myofibril assembly
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042383 C sarcolemma
GO:0045185 P maintenance of protein location
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
Transcript
Level		FPKM:11.94 TPM:6.21
ORF EntryO_BomoMSG14209_complete:A_BomoMSG_c24707_g1_i3
Sequence
(Nucleotide)
GACGTGTGCTCTTCCGATCTCCGTCGCAGGCGGAGCACTCGTCGCCGGTCGTCACAGTTT
ACGACTACGAACTCGCAAAAGTTACGAACGAACCATGAGGACGACTTATATAACAAAAAT
AGTGTTTCGTATTTAAATTAATTCTGTGCTGTGTTTCTATTAACGATGGCTTTATATGTG
TGTGTGTTACTGTGCGTGTGCGCCTTCGTTTCGGGGTTCAACGTGGACATACCCTCGAGG
GTGGTTTATAGGGGAAATGAAAATTCTATGTTTGGATTTACCGTTCAGGCTCACATTGAC
GGAGATCAGAAAATGATCCTGGTCGGAGCGCCAGAGGACGACCGTTATCCGGCCCGCTAC
AACAATATCTCCCGACCCGGCGCCGTATACCGCTGCGAGCCGGGCAGGAGGGCGTACTCC
TCCGAGGGCCACGAGCGTCCACTCGAGAGATGCCAAGAAATGGTCTTTGATAAACGATTC
TCTAATAACGTGGATCCCCAAGGTCGGCAGGTGGAGGAGAAGTCGAACCAGTGGTTTGGA
GCCACGCTCACCAGTACCGGCAGAAACGGGCCTATTGTGGCTTGCGCTCCTCGCTTCGTG
TCCTTCGTTTCTGCGAAGCTGAATTTCAGGGATCCGGTTGGTACGTGCTACGTTGCCAAA
TCTTCAAGGGCTGAAGACGTCACAGAATTTTCACCTTGCAGGACTGCGACTCACGGTCAA
CGCAAAACTGGTGTTTGTCAGGCTGGTTTTTCTGCCGCTATTTCTAAGGATAGCCAACGT
TTGTTCATTGGCGCACCGGGCAGCTTCTATTGGCAAGGACGAACGTTTTCAATTGAACCA
AACGAAAGATTCCACTACTATATGCCGAAAATACCGGACGAAGGTCAGCTGATGTCACAG
ACGCTATACGCCCGGCCGGCCCTTATAGCTACGCTAGAGTCAAGTCCTAGGTACGACGAC
TCTTACATGGGATACTCTATAACCGTTGGTGATTTTGCTGGACAAGGCATTCAGAGTGTT
GCTGTGGGTATGCCTAGAGGTGCTGACTTGAGGGGTTTGGTGGTACTCTACACTTGGGAG
CTCCAGAACATCAAGAATATATCCGGCTCTCAGATCGGAGCATACTTCGGTTACAGTCTC
GCTTCTGGTGACATTGACGGTGATGGAACCGATGACGTCATAGTAGGAGCTCCAATGTTC
ACCAAGCCGAGAAGCGACGGATACGAACACGGAAGAATCTATGTTATTTACCAGGGAACT
GACAGGTCGTTCTCAAGAAGTCACGCAAGGACCGGCGAGGTCTCCCAGGGCAGGTTCGGG
TTGGCGGTAACGTCACTCGGTGACATCAACTATGACGGATTCGGCGATATCGCGGTGGGA
GCTCCATACGGCGGAGAGAAAGGCCGGGGCGTGGTCTACATCTACCACGGAAGCGAAGTC
GGCATATTGGAGAAGTACTCGCAGGCCATCACCGCGGAGGAGATCTCGCCGACCTTGAGC
ACGTTCGGCTTCTCGCTGTCCGGCGGAGTGGACCTCGACAACAACAACTACACCGATTTG
GCAGTCGGAGCCTATAAGTCCAACAGTGTTGTGTTTTTAAAGTCTCGTCCCGTCGTCAAG
GTGAGTGCCGAAGTGAAGTTCATGGGCGAGAGCAAGCTCATCTCGCTCACGGACAAGAAG
TGCCATCTCAGTAACGGCACGGAGGTCGCGTGCGCCCAGGTCATGTTCTGTCTCACCTAC
ACCGGGGTCAACGTGGACCAGCAGATAAATTTCGAGGTGACTTTAGACCTGGATTCGCGT
CAGACGACCAGCAAGCGACTGTTCTTAGCTGAAACCAGAGAGACGACATACAAGACCCAC
ATCATGCTGACGCAGGGACTGCAGGAGTGCAAAGATGTCGTTGTCTACTTAGATGAGGAG
ATCCGCGACAAGCTGACGCCCATAGAGGTGAAGCTGTCGTACGAGCTGGTGCCGCAGCCG
TCGGGCGCCGCCGTCCCGCCCGTGCTGGACCGCACGCGCGCCGCCGCGCACTCCGACGCG
CTCCACATACAGAAGAACTGCGGACCCGACAACATCTGCATCCCCGACCTCAGGATGTCC
GCCGCCACCCCGATCGTGAACTACGTTCTCGGCTCCGGAGAAAACTTGAACATCGATGTG
AAAGTGGAGAACTCCGGCGAGGACGCCTTCGAAGCTGCCTACTACCTGCTGATTCCTGCC
GGAGTTACATACGCGAAGACCGAACGTTTAGACAAGGACAATATAGTGACTCCTATATAC
TGTTCTATAGAGAAGAGGGAATCCGACGGGAACTCTACTTTGAAGTGTGATATAGGCAAC
CCCATGGCCAGTGGACAGAAGGTGAACTTCCGCGTGATCCTCGAAGTGGACGCGCTCGTG
ACGTCACTGAACTTCTACATGGAAGCGAACTCCACCAACCCCGAGCAAGGAACCGATTAC
GACAACGTCATGAACATGAACATCGGCGTCATCATCAGAGCACAGCTCTCTGTCATCGGG
ACCTCAGACCCGCCCGAGCTCCATTACAACGCGTCGGTATACGAAGCGACCGACCTGAAG
GACGACACCAAGCTGGGCCCCCCCGTGATCCACAAGTACAGCATCAAGAACGAGGGGCCC
TTCACCGTAGACGAAGCCGAGATGTACTTCATGTGGCCCTATCAGACTCTTGAAGGCGAA
AACCTGATGTACATGCTGGTGCAGCCGCAGTGGCTCGGGAACATCAAGTGCAACGTGGCG
CGACACATCAACACAGAGAACCTCTTCGTCCAGAATCCCTACATGCCTCTGCTCGAAAAG
GAAAGAGAAGCAATGGCGAGCACCAACATGTACACTGAAGCACAGCTCGTCGGTGGCTTC
GGATATTACGGGCAGACGCAATGGGAGCAGCATTCCACCAGCGGCGGTACAGTGACGTCA
CAATCTGGAGGTTTCGTGTCAGGTGGACAACAGGGATCGTCCACCCAAACTGGCCCCGCC
AATTCCGGTGGTCAGCTTAGTAGCGGTCAAACTGCTGGTGGTCAGTTCACTCACACTTCT
GGAGGTCAATACAGCGGAGGTCAAACTGCTGGTGGGCAGTTTAGTCAATCTTCCGGAGGT
CCATACGGTGGAGATCACAGTGCTGGTGGGCAGTTTAGTCAAACTTCCGGAGGTCAGTAT
AGTGGAGGTCAAGAACAGCAATCTGGACAACATCAGTTCAGTCAGGGAGGACAGAACGGC
GGAACTACTTATACATACAAGTGGACGAATGGACAAGGTCTGACTGTTGAAGAACAGGAG
AAAATCAAGAAAAGTCTTGAAGCCTTCGCACAAGGAAACGGGCAGGGCGGTTTCACCCAG
GGTGGCTTCACTCAAGGAGCCGACGGACAGATCTATGTCGATGGAGGAAGAGTCGTTCGC
ATTAGGAATATAACGACAGTTTACGACGCAAATAACAACACCATATTCCAGACTGAGACT
AGCACGGAATACGGAAAACTTGGGCATGAAGGTGAAGCTGGAAGTTCATTTAATACATAC
GTTAATAACCAAGGAGGACAGCAACACAGCGGCTCGTTCGCTCACGGCTCTGGTGGTTAC
GTCCAAGGTTCGGGCCAAACTCAGACCCAAGGTGGACAAAATTGGCAAGGCTCTGTTCAA
GGAAATAGTCAGTTCTCTCAAGGCTCAGGATCTGGACAAGGCTTTGTCCATGGATCCTGG
GGAACCACAGAGACAGTTAACCCTGACCTTGTGAAAGCCGGGTCGTCGACTTTCAGAGGA
GCCTCAACAGTCACTGTAGTGGGTGACGAAGAAGACAACGAAGGACTTGGTTTTGGAGCT
TTCGCTGCTTCTAACCCTAACAATGAGTTCAAATACGCGATCGGTGACGTAACCAACGCC
GGCAGCGGACAAGCTGGAAGTCGCACCGGCACTGCTGGTGGTAGTTACCAATCTGGCGGG
GCTTATCAAGCTGGAGGAGCCGGGCATCAAGCTGGAGGAGGTGCTTATCTGTCTGGTGGA
GGCAGTTACCGAACTGGAGGTTCTGCTTATCAGTCTGGGGGGAGCGCACAGGATGGAAGC
CGATCGTGGAGCAGTGGATATTCTTATTCTTCTCAATCAGGAGGTGGCTCTTCATACAAC
AGCCATTCTGGAAATTATGGCTCCACTAGTAGCCGAGAAAACACCAGGAGAAGGAGACAG
GTCGATCAGTCACAAGTTGACAAGCAACTCAAGGACATCTTAACCAACTGTCAGGAGAAA
TACAAATGTGAAGTGATGAGGTGCACCACGGGCAGGCTGCTGAAGGGCCAGGAGGTGTGG
GTGGCGCTGCGGTCCAGGATCAACGCAACTGTACTTAACGAGATCTCGAAGGAGCGGCCG
ATAGTGCTGTCGTCGCTGTGCGCGGCGCGCGTGTCGCGGCTGGGCGGCGGCGCGGCGGGC
GGCGCGG
(4447 bp)

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