SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24641_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		DNA_damage-binding_protein_1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0031464 C Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
Transcript
Level		FPKM:22.49 TPM:11.70
ORF EntryO_BomoMSG14083_5prime_partial:A_BomoMSG_c24641_g1_i1
Sequence
(Nucleotide)
CGCGGGCGCGGGGTGGTGCGTGACGTCACAGTGGCGCGCGCCCGCCGCGCTGTCCGTGGT
GGCGTGCGCGCGCAGCCGCCTCGTGTGCGCCGCCGGCCCGCGCCTCTACCTGCTGCTGCT
GCACGAAGCCGCCATCGAGCTCAAGGCCGAGGTGTGCATGGAGGAGGAGGTGGCGTGCCT
GGACCTGGGCCCCGGCGAGGAGCAGGCGCTGCTGGGCGTGGGGCTGTGGACCGACATCTC
CGTGCGCGTGCTGCGCCTGCCCGACATGACGCCGCTGCACACCGAGAAGCTGTACGGAGA
GATAATACCGCGGTCGCTCATCATCAGCGTGCTGGAGGGCGTCTGCTACCTGCTGTGCGC
GCTGGGGGACGGCTCCATGTTCTACTTCACCGTCGACCAGAAGACCGGAGTGCTGTCCAA
CAAGAAGAAGGTGACCCTCGGCACCCAGCCCACCGTGCTCAGGACCTTCAGGTCGCTGTC
CACGACGAACATATTCGCGTGCTCGGACCGGCCCACCGTGATATTCTCGTCCAACCACAA
GCTCGTGTTCTCCAACGTCAACCTCAAGGAGGTCACGCACATGTGCTCGCTCAACGCGCA
GGCCTACCCCGACAGCCTGGCGCTGGCCACGGACAGCACGGTGACCATCGGCACCATCGA
CGAGATCCAGAAGCTGCACATCCGCACCGTGCCGCTGGGGGAGACGCCGCGCAGGATCGC
CTACCAGGAGGCCTCGCAGACCTTCGCCGTGATAACGATGCGCGTGGAGAAGCTGGAGTG
GGGCGGCGGCGAGGCGGGGCGGGCGCTGGACCACGAGCTGCACAACCTGCTCATACTCGA
CCACCACACCTTCGAAGTGCTGCACTCGCACCAGCTGATGTCGAGCGAGCTGGCCATGTC
GCTGATGTCGTGCCGCCTGGGGGACGACCCCGCGCACTACTACGCCGTGGGGACCGCCAT
ACTCAACCCTGAGGAGCCGGAGCCTAAAAAGGGCAGGATACTGCTGTTCCACTGGTCCGA
AGGGAAACTGGTACAAGTAGCCGAAAAGGAAATCAAAGGGGGCTGCTACTCGCTGGTGGA
GTTCAACGGCAAGCTACTGGCCGCCATCAACAGCACGGTGCGGCTGTTTGAGTGGACGTC
GGACAAGGAGCTGCGGCTGGAGTGCAGTCACTTCAACAACATCGTGGCTCTGTACCTGAA
GGCGAAGGGAGACTTCATCCTGGTCGGGGATCTGATGCGCTCCATGTCGCTACTGCAATA
TAAACAGATGGAGGGCAGCTTCGAGGAGATAGCCCGCGACTACAGCCCCAACTGGATGAC
GGCCGTGGAGATCCTGGACGACGACACGTTCCTGGGCGCAGAGAACAGCTTCAACCTTTT
CGTTTGTCAAAAGGACAGCGCGGCCACCACGGACGAGGACCGGCAGCAGATGGGCTACGC
GGGGCAGTTCCACCTCGGCGACATGGTCAACGTCATGCGCGCCGGCTCCCTCGTGGCGCC
GCACCACCACGCCGACTCCGCCGCGCCCACGCACCGCCCCGTGCTGCTCGCCACCGTGCA
CGGCGCCATCTTTTTAGTGGCTCAGATATCCCAGGAGCTGTTCGAGTTCCTGCAGCAGGT
GGAGGAGCGGCTGTCGCACTGCATCAAGTCCGTGGGCCGCATCCCGCACGCCTTCTGGCG
CTCCTTCAACACCGACATCAAGACCGAGCCCGCCGAGGGGTTCGTCGACGGGGACCTCAT
CGAGACCTTCCTCGACCTCAACAGGGACGTGCAGCACGACATCGTCAAGGGACTACAGAT
CGACGAGGGCAGCGGCATGATGAGGGACGCCAAAATAGACGACTTAATCAAAATAGTGGA
AGACCTAACGAGGATACATTGAGCCGTTGTAATAAGCAATCTATTTGTAACTGTTATGGT
GGATTGGGTTATGCGAGAGGAACTAATCAGCTGCCAAAGCCTTCAAAATTAATAGCAATT
CGATTAAATCGATATTAAACTTTATGATACTTAATTAATTGGTCTAGATTCGTGATACAC
ATTAATAATGAAATTTGATTCTAAAACGCGAGTCTTTGGTATAAACAATAACGCAGTAGT
GCCAAAATGATTGGGATTCAGATTTTTAAATGGAAATCTAAATGAACAATTATAGATCTG
TTTATCATTAGTTGGAGAAAGACTGCTAGGTGGCGCAAAGGGCGGCCCAATCAATAAACC
ATTTCATATTTCCAGTTAATAAAGTATCAAAATTCAGTATTAGGAGACTGCGTTAGAAAG
GCTACAGAAAATTACATTATTCACATTATTCGTTCGAGG
(2319 bp)

- SilkBase 1999-2023 -