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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24602_g1_i3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:5.58 TPM:2.90
ORF EntryO_BomoMSG13999_3prime_partial:A_BomoMSG_c24602_g1_i3
Sequence
(Nucleotide)
CAAATGCCCCATTGTCAAAAACAATAGTACTTGTTTTGATGACATTTGGCACAATAATAA
TTACTTTTAAATAGCTACAAGATGAAGACTGAAACCCCACAGCCTACGGATAAACTTAAA
ATACCATTACCGACACTATCACAGATTAACGCGGATAGAATAACACAGCTTGCAAATCAG
TACTGGTCACCGCAAACCAAGGAATCTCACTTACCTTATGATGCTTCTATTGTGGAGTCA
ATATACCATGCAGAAATCCAGGGTTCAAGTTTCTCAGTTCGACGCATCATGATGTTAGAG
TTCTCACAATACCTCGAGAACTATCTGTGGCCATACTATGAAGCTGGCAAGGCATCTCAC
TCACACATGATGTCTATAATAGTGATGATAAATGAGAAGTTCCGTGAGCGAGTTCCCGCT
TGGCAGGCATTTTTAAAGCAACCGGAGCACTTTCCGGCCTTCTTTGAACAAGTCCTTCGT
GCCAGTATTGCTGAAGACGACACTAGTCGTAACATGAGGGATCAGACTGCATTACTGCTA
TTCCTGAATCATTGCTTCGGCAGCATGGAAGTAGAGCTCTGCAGGGATCAAGTCAAGAGG
CTTGTGTCCCTTAGTATGTGGATTAGTTTACAAGAAGGCAGAAGAAATCAGGAATTCAAA
GCGGTACCAAAGTGGCGTAAATATTGGAGAGCCATACAGAAAAAGGACAAGCCAGAGTTA
TTGGAAAAATTGAACTGGGAACGAAGATATTTGCAAAGACTGATGATCAAGTTTATGGGA
ATTCTAGAGAAAATACCCGAAAACGGGGAAATTGATTCGTATGTTGTGAGGTACTGCGAA
CGTTTCCTGGAATTGATGATAGACCTGGAGGCTTTACTGCCGACGCGCCGTTTCTTCAAC
ACGGTGATGGACGACTGTCATCTCGTGGTGCGCTGTCAGATGTCAGCACTCGCCCAGAGA
CCAGAGGGGCAACTCTTTACACAACTGCTACAAATGCTGAAGTTTTACGCAAGATTTGAG
ATTAGCGATCAGACCGGAGATCCTATGACCGACCGTGACATGACATTACAGCACTACTCA
AAAATCACCTCACTACAGAAAGCCGC
(1106 bp)

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