SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24600_g2_i1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110383640_[Helicoverpa_armigera]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0020002 C host cell plasma membrane
GO:0033644 C host cell membrane
GO:0039660 F structural constituent of virion
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:66.49 TPM:34.59
ORF EntryO_BomoMSG13988_5prime_partial:A_BomoMSG_c24600_g2_i1
Sequence
(Nucleotide)
GGTACTGCCTCACTGTCATTGACCGCTTCACCCGATGGCCTGAGGTGATACCACTCAGCG
AAATTACAGCTGAAGCTTGTGCTGCCGCTCTCGTTAGCGGCTGGATTGCCAGATTTGGAT
GTCCACTGAGAGTAACTACCGACCGCGGTCGTCAATTCGAGAGTCACTTATTCAAAGCCA
TAGCTGCATTAATAGGTGCTCACCACCTCCGGACTACCGCATATCACCCCGCCGCCAACG
GAATAGTCGAACGAATGCATCGCCAGTTGAAGGCAGCCATCATGTGCCATACACCTTCGC
AATGGACTGAAGCACTTCCTCTCGTACTGATGGGCATGCGCAGTTCCTGGAAGGATGACA
TTGACGCATCTCCTGCAGAGCTGGTGTACGGCGAGCCCCTCTGTCTGCCAGGTCAATTCA
TTTCACCAAATGAAGACTACAAAGTGTCTGACGTCACCCAGTATGCAACTCGTCTACGTG
CATGCATGGCGAATTTGACACCGAGACCGACATCCTGGCATAGCAATTCACCATTTTATA
TACCTCGCGATTTACATACAACCTCCCATGTCTTCATCCGACAAGATCATGTGCGTGGTT
CTCTGGTACCACCATATGCTGGTCCCTTCAAGGTTGTCAAAAGGCAGCCAAAATTCTTCA
CTGTCAAAGTTCGAGGGAAGCTTGTAAATGTCTCCATAGATCGTCTAAAGCCGGCCTATA
TGACGAGAGTTCCAGAAGGTGTGTCTGCAACCAAGCCTGTTGAAAAGACCACAAGAAGCG
GCCGAAAGATTAAACTGCCTGATTACTATCGACCGAAGCCACGGTCTCGCCGGGGGAGTG
ATGTGGCGACTCACTTACTCGCCACTACTTGGGCAACCGCCTTACAATTCCACAAAATCG
CTGTCGCCTATGAATTCAGGCAATCATCTATTATTGTTGTTCAACACTTCGGAATCTTAA
GAAACTGCGGGCAGTACTCATCGATATTTGCTGTGCTACCTATCGTTCGTATCGTGTAGC
CGAAAGAGAGTATC
(1034 bp)

- SilkBase 1999-2023 -