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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24600_g1_i6
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:23.38 TPM:12.16
ORF EntryO_BomoMSG13997_5prime_partial:A_BomoMSG_c24600_g1_i6
Sequence
(Nucleotide)
GCAGAAATAGGCAGGGTGGTGGTGTGGCGACTCACTTACTCGCCACTACTTGGGCAACCG
CCTTACAATTCCACAAAATCGCTGTCGCCTATGAATTCAGGCAATCATCTATTATTGTTG
TTCAACACTTCGGAATCTTAAGAAACTGCGGGCAGTACTCATCGATATTTGCTGTGCTAC
CTATCGTTCGTGTCAGTGCTTTACTACTCCTATATGTTACTTCTTTATGGTACCCCTCTT
GTTATAGTTTGTTTGTGTATATTTGTATCTACAATAAACTATTTAAAGCAGTACATATTT
ATACTCACTGGGTAAACCATCCTTCGTGTCCGCGCCTACCTAATACAGTTAGAAGCAAAA
CTACTACATCTACAGTGGTACTTCTACAGTGGTGACCCTCGACAGCAAGAAGAACCGAAG
ATAAGTGGATTAAATGTATAATTAATTATCGTATACATTATCGTTTTCGGCTATAACATT
TTTGTTCAACAAGGTAGACGCAAAATATTTTTAACCGGTGGTCCAAGTCATACGTACTGA
GCGTATTTGAATATTTATCCGGTATGGCCCAAAAAGAAGATCCAAAGATGTCTCAAGAGA
TCTACAGAGTTGGTGTGCGCATTCCGCCATTCTGCTCAGAGGACCCAGAAATGTGGTTCA
GTCAGATAGAGATGCAATTTAAGCTCTCAGGGATATCTGTGGACGATACTAAGTTTACGT
ATGTGTCAGCGAACCTGGAACCACAGTACGCCAAGGAGGTAAGAGACATCATAACGAAAC
CGCCAGCTTCAAATAAATACGAAAAACTCAAAACAGAGCTGATCAAGCGACTATCAATAT
CACAGGAGAAGCGTGTAAGACAACTTCTCATGCACGAAGAACTCGGAGATCGGAAACCGT
CTCAGTTTCTACGCCACTTGACAAGTCTAGCTGGTTCAGACGTTCCATCTGATTTTATAA
TAACTATCTGGACCAGTCGTCTGCCTGTGAACGTGCAAACAGCAGTCGCTACGATTAAAG
GATCGTCAATGGAGAAGCTAAGTGACTTGGCAGATGTCGTATATGAAATGGCCCCAACAG
TACCACAGGTGGCAAGCGCGTCTTCCCAAGCCCAAGGCAATGAGCAAGGCAATCCGACGA
TGACTGAGATGGCCCAGCAAATCAATTCGCTGACACAGCAAATCAGCATGCTCTCTAAAC
AGGTGGCTGGAAGAAGCCGTTCGAGAAATAGATCTAGGCGCCGTTGGAACGGTCGTCCTC
AAAGTCGCACCAAGCCTAGACAACCACCCGCAGATCACCCTTACTGTTTCTACCACTTTA
CTTATGGGACAAAAGCTTATAAGTGCAAACAGCCATGCAGTTTCGCGTCGGAAAACTCCT
GGGGCGGTCGGAAGTAGCGGCCAACGACTGCCCACATTCTTCAGGCCGTCTTTTTATCAC
CGACCGTACTTCAAAAATGCAGTTCCTAGTGGACACTGGTTCCGATTTGTGTGTTTTTCC
ACGGTCGGCTGTGAAGGCGCCCTGTACCAAGTCGAAATATGATCTCGTAGCCGCGAATAA
TTCTATTATACACACCTATGGCCCTGTAACTCTTCATTTAGACTTTGGACTAAGAAGAGA
CTTCGCGTGGAAATTCACTGTTGCAGACGTATCTAAGCCCATAATCGGAGTGGATTTCTT
GTCTTACTACAACTTACTCGTCGATTGCAGAAAACAACGTATTATTGATGGCATCACTTC
TCTGTCTGCAGTCGCGACACCTATCGGGATGACTAAAGACCTTCCTTCTGTCAAAGCCGT
CACTGGTGAAACTGACTTCCACGATATTCTGAGAGAGTTCCCAGAAATCACAAGGCCAGC
AGGTATGCTCTCTACCACATTTAAGCATAACACCGTTCATCATATTAGAACTACACCGGG
ACCTCCCGTTGCTTGCAAGCCTCGACGTTTGGATCCAGCACGTATGCAAGCCGCGAAGAA
AGAGTTCGAGGATATGTTGGCAAGCGGCGTAGCCCAGCGTTCAGAGAGTGCATGGTCTTC
TGCTCTGCACTTGGTAAAGAAGAAAGATGACGGATGGCGTCCTTGTGGCGATTACCGATC
ACTGAATGCGAGAACGATACCTGATAGATATCCAGTACGCCACATCCATGACTTCTCACA
ACAGGTTTCTGGATGTTCCATCTTTTCTAAAATTGATTTGGTGAAGGCTTATCATCAGAT
AGCCGTTAATCCTGAGGATATACCTAAAACAGCCATCACTACTCCTTTTGGACTTTTCGA
ATTTCCATTTATGACCTTTAGTTTGAGGAATGCCGCTCAGACATTCCAAAGGTTCATAGA
TGAGGTGCTACTAGGCCTCGACTTCACCTATGGATATATTGATGATATATTACTGTTTTC
TTCATCGCTAGAGGAACATAAGTGTCATCTACGTCAACTCTTTGATCGTCTCCGGCAGTA
TGGCATTCTGGTGAACACAACTAAATGTACTTTTGGTCAATCTGTCGTGGAATTCCTAGG
ATATGAAGTATCTGCTACAGGTACTAAGCCATTGGACACTAAAGTCCAAGCTATCCAGGA
ATTTCCTGCTCCTAAAACGGTGAAGGAACTCCGAAGATTTTTAGGCATGCTTAATTTCTA
CCGCCGTTTCATACCTAACGCCGCCCAGTTACAAGCTCCGTTGAACAACGCTCTGGCAGG
AGTTAAAATGAAAGGTTCACACCCTGTGGATATGGATGCAGTCATGTTAAAAGCCTTTGA
GGACTGTAAGACTTCTTTATCTCAGGCAACGCTTTTGTCTCATCCGGATCCAACCGCCGA
TCTTGCGATTGTCACTGACGCGTCTCTCACAGCGATTGGAGCTGTTCTACAACAAAGGAA
AGGTGAACATTGGGAACCACTCGCTTTCTACTCCCACAAGCTTAGTTCCACCCAATCGAA
GTACAGTCCATATGATCGAGAATTACTGTCAGTTTATGAGGCAATAAAGCACTTTCGACA
CATGATTGAAGCGAGAAATTTCACCGTCTTCACTGATCATAAACCGCTGATCTTTGCCTT
CTCAGTAAACAGGGAGAAATGTTCACCAAGGCAATTCAGATATCTTGACTACATATCACA
GTTTACTACGGATATTAAATATATACCTGGAAAGGATAACGTAGTCGCCGACGCACTTTC
TCGGGTGGATGAAGTCGCTCCATGTATCGACTATGAACATCTTGCACGATCTCAGGAACA
AGATCCAGAGCTGCAAGATCTTCTGCGTAATGGAAGTTCTCTAAAATTAGAAAAGTTATC
TTCTGAGTATAGTAGCTTACCCGTTTATTGCGACACCAGTGTGCACCCTCCACGACCATT
CATCACAAAAGATATGCGAAGACAAGTCTTCAACACACTACATGGACTTCATCACCCAGG
ATCGTCCGCTACAGTCCGACTGGTGGCGCAAAGATTTGTGTGGCCAGGGATTCGGAAAGA
CTGTAGAGAGTGGTCAAGACAATGCTTAAACTGTCAGAGAAGTAAAGTAAGTCGCCATAC
AGTTTCTCCTCTTTCCTCTTTCCTTACCCCTTCGTCAAGATTCACTCATATCCATCTTGA
CATCGTAGGGCCTCTAAATCTGTCTGCTGGTTTCA
(3635 bp)

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