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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24581_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		negative_elongation_factor_E_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:10.73 TPM:5.58
ORF EntryO_BomoMSG13958_complete:A_BomoMSG_c24581_g1_i2
Sequence
(Nucleotide)
ACTTTTGAACGTTAATGTATCTCATATTGCTGTATAAGTTACGTTGCCTTTGCCTGTTCA
GTGGAACAAACAAACAAAAGAATCTGTAAACAAGTGATAAAACAAAATTTAGAATTATAA
CCGTGAATTAATAAACCGTGAATAAATAAAAATTATATTAATTTAGGTACATACAAATTA
TAATTATTAGTATCTTTATACTTTTATAAATTGCCTTTTCTGACAGAAAATTAAACTTTT
ATGTAAACAAATTTAAAAATGGTCTATTTACATTTTCCTTCGAACCTAACCGAGGAAGAA
CTAATGCTACAAGCTAAATACCAGAAACTAAAAAAGAAGAAGAAAGCTTTGCAAGCCCTT
AAGGCACCAAAACCCGAACCAGAAAAGCCAATTTTACCAAAAAGGCCTACAGAAGCCAGA
GATGCCAGGGAAATAGCTAGAAAATTGCTGAAAAGTGGTGCTATTCAAGCTATTAAAAGT
CCTCCAACTCAGCCACAGAACACCACTTTCAAAAAACCACGTGCAGGTCGAGAAAGGAAA
TTAAGTGGTTCTGCTGGAGTACCTGGAGGTGTTGCTTCATATCAACCATTCAGTGCTTCA
CAAGAACCTCCACCTCAAGAAGAGAAACAAACTCCAAGAGTTAAATATCTTTATGACTCT
TTTGTCACTGCCAGAGAAAAGGACGACAAAGGCTCACGCACACCCAATCCAGGTGGCAGT
ACACCGTCTCAATCAGATGGTCGCAGTTGTACTTTACAATTGGTCGGTCAACGGATATCT
GAAGAGATATTGAGGAGACGCCTGGCTACTTTTGAGCCCTTTGCATTCATGCCAAAAGAT
GACAAGGCTTTCTTAACCTTCGATAGTCCTGACATTGCGTCGCACGCTTTGTCGGCTCTT
GAAGGCAACGAGGAGGGCTGGCGTATAAACATCGCGAGAAGACCTCCGCAGCAACAAGGG
ACTTGGAGTGCGTCGTCTTCACCACGAAATCCACAACCGCCTCCCAAGGACTTGAAACGT
ACATTATTGACTTATGATGATATATTTGATTAAACGGAGC
(1060 bp)

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