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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24553_g1_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
Ontology
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:6.71 TPM:3.49
ORF EntryO_BomoMSG13881_3prime_partial:A_BomoMSG_c24553_g1_i1
Sequence
(Nucleotide)
TTAAATATATTAGATGTATACCTATATACATAAATACATTTATAGCTCTAATTAAAAATC
CAAAAATACATTTCTGGATCAAAATGATGGTGAATATACTGAAACCTTAAATAACTGAAC
TTTCAATATGAGACAGCAAAACTTAGAGACACATCTAAATTTTAATATAAATAATCATAC
AAATAATGTTAATGATAGAAAATGGGTCACCAATGGAGAGACAGCAATATTACTTAATGA
TCCAGCAATATCACATACTAAAATTATAAGGAAATGGAATCGTCTATCACGTCTTCAGAG
ATCCATAGTGTATGCTGTGCTAGTTGTGACTGCAACAGCTCTTTTGTTGCTGTATTTTTC
TAAAACTGGTATTGTCATCATTGAGCGAGGCAATGAAGATTCAGTTCAGGAAAAATTAAG
AAACACATCTCTAAATGCCAAACCTGCATTGGACAACACAGTTCAAATAAAATATGATCC
TACAGTGTATGAGAGGCCTGTTTTTACAGGACCAAAAAATGATCGGCAACGGGCATTGGT
GGAAAGTTTTAGACATGCATGGAGAGGGTATAAAGAGCATGCTTGGGGCCATGACAATCT
AAAACCAGTCTCTGGTATGGCTTCTGACTGGTTCTCTCTTGGACTTACAATTGTTGACAG
TTTGGATACAGCTTACATAATGGGACTAACTGATGTATTTGAGGAAGGCAAGCAATGGAT
CAAAGAAGAACTAATATTCACAAAAAATAAAGATGTTAATTTCTTTGAAGTCACCATTAG
AATACTAGGTGGCTTGTTAACAAATCATTATTTCACTCAAGACCAGCTATTTCTTGATAA
AGCTATTGACCTCGGAGACCGTCTCATGGCAGCATTTTCGTCACCATCTGGCATCCCATA
CTCTGATGTGAACTTGGGAGCTAGAACTGCTCATGCTCCTGAATGGTCACACTACAGCAC
CACAGCTGAAGTTACTACTGTGCAGTTGGAGTTTAGGCAACTGTCCAGAGCTAGTGGCAA
CCCTATATTCGAGGAGGCAGCAGCAGCCGTTTCCGAGAAGATTCATCAGCTACCAAAAAA
ACATGGACTTGTTCCAATATTTATTAATCCGAATACAGGACATTTTCTGCCTCACGCCAC
CATCACTCTCGGAGCAAGAGGGGATAGTTATTATGAATACCTGCTAAAACAATGGCTCCA
GACTGGGAAAACAATCAACTATTTACTGGATGATTATTTAACCGGCATAGAAGGTGTACG
TGAATTTTTGGCAAAACGTTCATCACCTAATAAACGATTGTTCATCGGAGAGTTGTCTGC
TGGTTCAGAGGCTTTCAATCCGAAAATGGATCATTTGACCTGTTTCTTGCCTGGAACATT
GGCCTTAGGTCATTTGAATGGCCTCCCCGACTGGCACATGACAATGGCCGAGGAACTTCT
CTACACTTGCTATTTAACTTATGCTGCACATCCAACGTTTTTAGCTCCAGAAATAACACA
TTTCAATCTCGCGAGCACAACAGATGATATGTATACGAAATCGGCCGATGCTCACAGCTT
ATTGCGACCGGAATTTATTGAGAGTTTATGGTATATGTATCAAATAACTGGCAATACTAC
CTATCAAGAATGGGGCTGGCAGATATTCCAGGGCTTCGAAAAATATGCCAAAGTGCCAAA
CGGCTATTCGTCTCTAACAAACGTGAAATCTGAAAATCCAATACCACGTGACATGATGGA
ATCTTTCTTTTTGTCAGAAACACTTAAGTACTTGTACTTATTATTGAGTGACGATCGCTT
TCTCATCGATTTGAATAAGTATGTCGTCAATTCGGAAGCGCACCC
(1845 bp)

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