SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24497_g1_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
Ontology
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0052909 F 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
Transcript
Level		FPKM:7.86 TPM:4.09
ORF EntryO_BomoMSG13781_internal:A_BomoMSG_c24497_g1_i2
Sequence
(Nucleotide)
CGTGTGCAAGGTACTCCTTATCAAGCAAAATTACAAATTTTGGTTGGAGATGTTTTGAAA
ACAGAATTACCATTTTTTGATATATGTGTAGCAAATATTCCATATCAAATTAGTTCACCT
TTAGTGTTCAAATTGCTGCTACACAGACCTTTCTTTAGGTGTGCAGTGCTCATGTTTCAA
AAGGAGTTTGCACAGAGATTAGTTGCAAAGCCTGGTGATAAATTGTACTGCAGACTGTCA
ATAAATACACAATTATTGGCTAGAGTTGATATGCTGATGAAGGTTGGCAAGAACAATTTC
AGACCACCACCCAAAGTAGAGTCTAGTGTTGTGAGAATAGAACCAAGAAATCCACCTCCG
CCTATAAATTTTGTAGAATGGGATGGTTTGACTAGAATAGCATTTGTAAGAAAAAATAAA
ACACTCTCAGCTGCATTCAAACATGCAACCACAATGGCTGCTTTGGAGAAAAATTACAGG
GTCCATTGTTCTTTACACAATAAGGAAATCCCTGAAGATTTTGATATTAAGCAAAAAGTA
CATGAAATATTGACATCCTGTGAAGCTGATCAAATGAGG
(579 bp)

- SilkBase 1999-2023 -