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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24495_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		protein_ovo_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008343 P adult feeding behavior
GO:0008360 P regulation of cell shape
GO:0009913 P epidermal cell differentiation
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0018992 P germ-line sex determination
GO:0019099 P female germ-line sex determination
GO:0030154 P cell differentiation
GO:0035017 P cuticle pattern formation
GO:0035316 P non-sensory hair organization
GO:0042335 P cuticle development
GO:0042810 P pheromone metabolic process
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048067 P cuticle pigmentation
GO:0048477 P oogenesis
GO:0070896 P positive regulation of transposon integration
Transcript
Level		FPKM:0.85 TPM:0.44
ORF EntryO_BomoMSG13778_5prime_partial:A_BomoMSG_c24495_g1_i1
Sequence
(Nucleotide)
TCCATCAACCAAAAACGGTCAAAGTTCATTTAATGCAAACAGCAACTTCTCTAATGAATT
CAATATGATTAACGGATTCAACATGGACTGTGAAAATAACGAAAATACAACAAATTTTAC
GGAACAAAGCAAACAGTACTCGTTGATGCAAAACGCTCCTTATGGACTAGCACTAAAAGA
TGAAGAAGTAGACTATGAGAATAAGTTAGAAAATTTAGGTGCTATTGGTAATTACAGCAG
TAATTTCGACGATCCGATGGTTGTCGAAGACGTTATTGACAATTATCAATTTAACGCAAC
ACTGACCTTCCCTGGGTCAAATGAAGGCATCTTAGGAAATTTGTCGGATTCCACTGAGGA
TTTTGCCGATTTGTTAAACAATCCTGTAGAATCCTTAACAGATTCAGAAGTACGAGAATC
GTCATCCATATCTCCGGACTCCGTTCATAACGCTGTAGACATAGAAGCATTGGCTGAACA
AGTACATTTAAGTAGACAGTATTATGAAAAGGCTAACTATCTAGCATTTGCCAACCAAGA
ACAGAGTCCTTCCTATAACTTTGCTAAAGAACGTCCTGATTTATTAATGCAATTAAATCC
TGCTCTTCTTCAACACAATGAAGGACAAATGCAACAGCTTCAAATTCATGTTCAGCTTCA
ACAAAGGCAACAGATTCTGTCACCGGGCTTCCCCTTCTCTAGTCACCCACTGGACCTTGA
TTCACCGACAGGAGTATCACTTCCATCACCCGGTGGAAACAACTCGTTAGATGGCAACAG
TCATATGGAGAATACTCCCATCAGTCCTGCAGCTGCTGTAAGTCTGAAGAAAGGCTCTGT
CACCGATACAAAAATTCAAATTTTACAACAGAGGTTAGGACTACCAGCAGAGCTTCCTCT
CGAATTCATCAATGGCGGACATGGTGTCAAAAATCCTTTGGCGACTGAAGCTAACGCAAG
ACAAAGGGAAGAAGAAAAAAACAAACAAGTATTAGTCAGTGAAGACGACCCAACAAAGTT
CGTTTGCAGAGTTTGCTCGAAAAATTTCAGCTTGCAGAGGCTCTTAAACCGACATATGAA
ATGCCACTCTGATGTAAAACGATACTTGTGCACATTTTGCGGCAAAGGATTTAATGACAC
ATTCGACCTTAAAAGACACACAAGAACGCACACCGGAGTCAGACCGTATAAATGTAATCT
GTGCGAAAAATCATTTACCCAAAGATGCTCACTGGAATCACATTGCTTAAAAGTGCACGG
AGTCCAGCACACGTATGCCTACAAAGAAAGAAGGACTAAGATGTACGTTTGTGAAGAATG
TGGACACACAACATCGGAGCCTGAAGAGCACTATATGCACCTGAAGAATGTGGACACACA
ACATCGGAGCCTGAAGAGCACTATATGCACCTGAAGAAGCAACATCCCTACTCTCCAGCA
CTGCTCAAATTTTATGACAAAAGACACTTCAAGTTCACGAATGCTGCATTCGCAAATCAA
CTCCTGGGTCAGCTGCCCATGCCAGTACACAATTAAAGTATTTTAATTATTTGAATCAGG
AGTCACATGACTTTATTCACCATGGTATAAAATTAACCAAAACGTGATAAATCAAGAAAA
TCAGAGAGCTTGTCTCAATAATTAGCTAGCTTTGGTGAATATTGAAAATGTGATTAGATC
ATCAATGTAGCTGATTCCAGTTAAACGAATAAAAGTACATATTTGAAGTCAAATCTATAC
ATTCCGTCCACTTTTTTCTATAAATTCCATGTACCATCCACCGTGATACTAAATTCCC
(1798 bp)

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