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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24494_g2_i2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		poly(A)-specific_ribonuclease_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:1.40 TPM:0.73
ORF EntryO_BomoMSG13774_complete:A_BomoMSG_c24494_g2_i2
Sequence
(Nucleotide)
GCTCTTCCGATCTCTAAGATTCTAGAAAATAAAAACAGATTATTAAATGTAAAAAGAGTC
AAGTCACAGGATGATCTCAAGAACCATGATGCTCTAAAGAAGGAACGAGAGTGGGAAGAT
TTTGAAGATGCTGTCGGCTTCTCAAAAGTAGCTAGGATGATAAGCGAGTCTGAGAAACTG
GTGGTCGGACACAACATGTTACTGGACGTAATGCACACATTGAATCATTTCTTCCAGCCT
TTACCTGCAGAATACACCCAGTTCAAAGAGTTTACACACTGCATGTTCCCACATATCTTA
GACACAAAATACATGTCAAGTTTGCCTCCATTTAAAGATAAGGTGAATTCAAGCATTCTG
AAACATTTGTTGGCAACACTGTCAGCTGCGCCATTTTCTCTGCCTAAAGTTGTGTCCGAT
GAAGGTCGAGGTTACAGTCAACTCCACGAGAAGCACCACGAAGCCGGCTACGACGCCTAC
GTCACGGGGCTCTGCTTCCTGGCCATGCACTCGCACCTCGCCAACATGAGGGGCGACGAC
ACCACAAGGTTCCTGTCCATCACGTCGCCGCTCATCAAGCCCTTCCTGAACAAGGTGTTC
CTGTCCAGGACGGCTCATCAGGACTCGCCGTTCATAAACCTGGCGGGACCGGAACCACTG
CCTCCCAGAGACCACGTGTTTCATTTGGCGTTTCCCAGAGAGTGGCAAAGGAATGAAATC
ACGCAACTATTTAGTCCGTTTGGTCCAATAACAGTACAATTCATCGATGATACGTCAGCG
TTCGTGGCGTTAGCGCGACGTGAACAGGCGACGTCTGTTAGCAAAGCACTCGCGAAGCAT
TCCAAGATAACCCTCACATCGTATTACAAGTATAAGAAGATTAATGATACGCCCAGCAGT
AAGATAACGACGAAAACGGCGGAGGCTGCGAACAACGACTGCAAGAAAACTGAGAAGACA
CCTGTGAGGACTTCAGCTCTACAGATTAACGCGACTGCTACTACGCCGGTTAATAAAGTT
ATTATACCGGAGAAGGTGCCCCGGGACCTATCCAACAGCGTGTCTCCTATAACTCCGCCG
AGGAAGAGAACGTTTTCGACGTCTTCCGGAGGATTCGAGGTAAATGAATTAGAATCGCCA
ACGAAGAAACTTAAAGACGCCAGCGAAACGAAGAAGAGAATCGATGAGAAGATTATAGAC
AGGTTCGATAGTGAAGCCAAGCCAGCCTGCGTGACTGTGTTCAAAGATGACGATTGCTGG
GATTGATTGTAAATAAATATGGCGCAAATCAAAAAAAAAAAAA
(1303 bp)

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