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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24486_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		leucine-rich_PPR_motif-containing_protein,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0000961 P negative regulation of mitochondrial RNA catabolic process
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0051015 F actin filament binding
GO:0051028 P mRNA transport
GO:0070129 P regulation of mitochondrial translation
Transcript
Level		FPKM:26.51 TPM:13.79
ORF EntryO_BomoMSG13761_complete:A_BomoMSG_c24486_g1_i1
Sequence
(Nucleotide)
GTCTCTTGTTCTAGCAGTTCTAGCACTGAAAGCCGTATTTATATAATAAGATAAATTTAC
TTGAATGTACCCAATCAAATTACAGTCATGTCGTCGTTGTTGAGATCAACGAAATTCGTT
CGGTACTTTACGGGTGCTGCAAGAACACTTATTTTGAATTCTGTGAAAACTGCCGAAGCC
AGTGCATTCCTCAACTCTAAAGCCTTAAGTGCTGCTAACAATGTTTTTGTACGAGATTAT
GCAACAACAAAGAAAACAGAAAGCCTTGACCCTCTGCTTCAGAAATTAGACTCGGAAGTT
AGAAGATATGGACGGATCACAAAAAGAGATATTGATGAAGTATTAGATGAAATTCAATCT
AAAAATGACATTACTAGCTCACAGTCTCTTCTTGTTATAAGATGTTGTGGTGAACTAGTC
CCAGAAGAGCTACCAGAACAAAGAACCTTACTTGTACAGAAAATATGGAGTGTTTTAACA
GAAAGAGGAATCGCAATGGACATCTCTCACTACAATGCATTGTTGAGAGTTTACATTGAA
AACCAACATCCGTTCTCGCCTGCACAGTTCCTTACAGAACTTGAAAATAAAGGATTACAG
CCAAATAGGGTCACCTATCAGAGACTCATGTGGCGTTATTGCCAAGAGGGAGATGTCGAG
GGAGCAACCAAAGTGCTAGAAAAGATGAGGGAGCTAAGCATGCCGGTTTCTGAGCCAGTT
CTGAACGCTTTAGTCATGGGTCATGCATTCCATGGTGATACTGAAGGAGCTAAGGCTGTA
TTAGAAACTATGGCAGGAGCTGGTTTGCAACCATCAAACCGTACTTATACTTTATTAGCG
TGCGGATATGCAAAACAAGGTGATATTGGGGGTGTCGAAGGCATCCTACAATTAGCTAAC
GAAAAGGATGCCTACATAACTGATAAGGATATATTAGATATAATCGAACATTTAGCCATT
GGAGGACATGAAGACAAAGTAGAAAATCTATTTAAACATCTTCAGAAAAGCATAGGCTAC
AATCAAGATGTTTGTAACCTTATTCTGAGACTGCTTAACAAAGGACTTGATGAGACCGCA
AAGAAAATATTTGCGACTATGCCCAAATCTTCGCATTTCGAAGATAACCTGTTCAAAGGG
GCCTTCTTTGTGAGACATTTACTAAGATTGAACAGATCCCCAGACTCTATAATTAAAACA
TGCAAGGATTTAACTCATGAAGGTCTTGTACCAAATGCAATTTACATTGCAACTGAGGGA
GCACTACAATCAGGAAATTGTGAACTAGCTCAGAAGCTATTTAAAGAACTGGTAAACGAA
GGTAAAGAAGTTAGACAGCATTACTATTGGCCTTTACTTGTAAAGAAAGGCAAGGAAAAA
GATGAAGAAGGTCTCTTGCAAATACTGCGAGACATGTCCACAAATAATATTCCAGCATCA
GGAGAGACATTAAGGGATTATGTCATACCTTACTTGACCACAAAAAGTAATGCGCAAAGC
GTTATCGTTAAACTTCAAATAGCGAATGTGCCAGTTATACATGCTGCACGTAATGTGATG
ATTCATCTTCTGGAATTGGGAAAAATAAATGAGGCATCAGAAATAGCGTTGCAATACCGT
CCTCGAGGGCAGTACAATTTAGTGGGGCGGCCCTTAGTTAATGCACTCTACAAAAGTAAA
GATATCAATTCCTTCATCAACATTTTACATGTTATCAGCAGCAAGCCGCCTCTTCAGTCC
GAACAAGACTCAACTACTGACGAAGCTCAAAACGATAGTAAAAATGAAATACGTGATATC
GGTCGCATTATCAAATCTGCAGTTAAAAGTTTACCTAAGAATGAAAGTGAAGGTATTTTA
GAAGCTGCTTATGCCAAAGGGCTTAGTATTGACATTGAGACAGCTGAAGCTATACAGCAA
TATCTCGGTGAAAATATGACAACGAAGGTGTCGCAATTACTATCAGAACTCAGTTCGTCT
CAATTAGAGCCTGTTCCAATCGAGAGTCCACGAAGGACTGAACAAGCTAATGATCGTTCA
GCGCTCGAAATCGAAAGCATCATCGCTAGATTAAAGGAAAAGGGCACCAATGTGAACCGT
CTTCAAAAACAACTGCTCTGTGCTTATATTAATGAAAAAAACATCGAAAAAGTCAAAAGT
TATCTGAGTGAACTTAGATTGTCTAATTTCGAGTTAAACACAGCCATTTTAGCACAGTTG
TTTGAATTTTTATGTGAAAATGATGAGATTGAACTTGCAAAAGAAATTAGAACAGAAATT
GAATCAAAGAATGAAGATTTCATATTGAGTCGTCTCAAATTGATTCAAATGGCACAAGCA
TTATTCCGAACCAATAGATATGATGAAGCCATACAGTTTTTAATAGAAAACAAATTTTCT
GATGCTGAAAATGTAGGATTTTTAGTTAATTCTAAATGTTGGCAAATTTTAAACAGCTTA
GCTGAACAAAAGGATTGTGAAAAAGTAAAAGAAGTAACAAAAACGTTGCTCGAAAACAAT
TATGTCCAGGCTTCGAATGTTTTATTTGGTCCTACAATCAAAGCGTACCTTCTTAACAAT
GACGTACAAGGCGCTCTAGTTGAATTTGAGAAATGCTGCAAGCAATATCGTTGCACTCCT
TGGAAGGGAGAATTGATGAAGGCATTAATTATGAAGGAAGATGCTAACCAATTACAGTGG
CTTGCTGATTTAAGTACACAGATACACGGTGAAGTAAACATTCTACATGATTTAGTACTT
GCGTTCGTTGAGTGCGGAAGACTGAGACAGGCACGTCGTATTCTCGAAACACCAGGATTG
CAGGCTCGACACAGACGCTTGGATGACGCTTGTCAGCGATACGTTGAGGAAGGGAAATCA
GAGTACTTGGAAGGATTACTTGAGGCAACGAAAGAACTTTCTCACATTGATCGCTCAAAC
ATCTTCTACCATTTACTCGTTACATACTGTAATGCCGATGAAACCGATAAAGCCCTCGGA
CTATGGACACTGCTTCAAGAAGAAAGCGAAGTACCGAGTAACCAATTTCTTGTCTACCTC
GGAAACCATTTGAAATCAAAGAACAGAGATGTACCGTTTATAATTCCGGAAAAAATAGAA
AAAGTTCAGTCCAAAAAGGAAGACATAATCCAAAAAATTGTCACACCTAAAGTACCTCAG
AAACCAACAAAGGCCGAAATCTCCACAAACATCGAGGCCCTTGTTAAAGACGGAAACTTG
GCACAAGCAATGGACGTCTTGCTTAAATCGATTGAAGTAGGCACCATGCCCAAATCGAAT
GTTGTTAAATATTTATTGAAGAATTTGGCCGAGGAGGGAAACGTTGAAAAGATTCAGCAA
CTAGGAAAGAATATCAGCGAAAACACGAAACGTAAAGTTACGTACGATGATAAACTGACT
TTGGCGATATTCAGAAGAGGCGCTGGTGGACAACACATTGACAACTTATTGGAATCTGTC
GAAGCAGCGAATATACGCGAGGATTTGGAAATAGCTCTCAGGAAATTCCCTAGAAGTAGT
GCACTAGCAAACTTGGTTAATGATACAGAGCTCGTTCAAAAATGCACCAAAATAGCGGAA
ATCGCAGCGTCGAAGGGTATAACCACGCCAGTTAATTTACTTTGGATGGAATTGATATTG
GCAGGAAAAGACGAAGAAGCACGAGACTTATGGAACAAATGGCTTATTACGGCACCGGTC
ATTGTATTCAGAAGACTGCTACAAGAGAGTTTCGTTAAAAACGAACCAGAAATAATAATG
AAATTAATAAACGCATTGAAAACAAATAAAACTTTACCAACCAGGTCATTAGGTAATGCG
TATTCAAGATTAATGAACTATTACTTACTGAACAACAACATCGCGGCTGCTGAAGCGTTG
CTGAGTGATGCTATTCAACAAGGTGTACCAAAAGAGCACATTAACAAATCAAGTTTGTTG
AGATTAAAGTCAGCAATCGAAGCAACTGTAAAAGAATTTAAACAGTTCGAAATTTAGTAA
CGCGAACACGACTCCCATAGGTTTATAATCTT
(4052 bp)

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