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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24474_g1_i1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		double-strand-break_repair_protein_rad21_homolog_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008278 C cohesin complex
GO:0016020 C membrane
GO:0016925 P protein sumoylation
GO:0034991 C nuclear meiotic cohesin complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:22.19 TPM:11.55
ORF EntryO_BomoMSG13726_5prime_partial:A_BomoMSG_c24474_g1_i1
Sequence
(Nucleotide)
TTGAAAACGTAATTGTTGTCATGTTTACGTTGATTGTAAAAAGTGAAATATTTAATGTGT
GACTAAATAATTGAAAAGTGTTGATGTGATTCTTGATCAGGAAGTGCCACTATCATCATG
TTTTATGCACATTTTGTGCTGGCTAAGAAGGGTCCGCTGGCCAAGATTTGGCTGGCGGCC
CACTGGGATAAGAAATTGACAAAAGCACACGTATTTGAAACTAATATCGAGAAATCAGTT
GATGGTATTTTAAAGCCTAAAGTGAAGATGGCATTGCGTACTTCTGGACACCTTTTGCTT
GGAGTTGTGAGAATCTACTCGAGAAAAGCCAAGTATCTGTTGCAAGACTGTAACGAAGCT
TTTGTCAAGATTAAGTTGGCCTTCAGACCTGGCATGGTAGATCTTCCCGAAGAGCACAGG
GAGGCTGCTATGAATGCTATCACCTTACCAGAGGTCTTTCATGACTTTGACACAGCCATG
CCTGAATTAAATGAGGTTGATATTGAAGCCCAATTCTCTTTAAACCAGTCAAGAGCAGAA
GAGATCACGATGCGTGAGGATTATGGATCATTAAACCTTGTCACCCATGATGATGGCTTT
GGAGACATGGGTTTTGACACTGATAATCCTGACATTATGAGAGAAGGTATTGGTTCTGAA
GGTGGACTGGAGCAGAGCAACCTACTTTTTGCTGATGGGTCATCATTAGAATTGGGAGGC
AAGGAGTCTAGTTCAGGTCCAGGTTCAGTGCACGCTCGCACTTTGGAGCCAGCCCCACAT
GCTCCTGTAGATGATGGTTTCGGTGGTACTATTGGAGATGTGCCGGACTTTGGACATGCA
GGAGGGCTGTTCGAAGGAGATTTGTTCGGAGATGTTACAGCTAGCGCAAGTGGTTCAGGC
ACGGCTTCAGGCATGCCTGGAGCTTCTGCACAACCACAGTCTTTACAGGCGGAGATAGAG
GCGGCGGGCGCGGGGCCGGCGGACGCGCCCGACTCTGATGACGACATGCCCGACCACTAC
GACGCGCCCTCGCCGCACCACAGTTGGGGTGGATCCCCGGTTCGCGAGGAGCCGGTGCCC
GAAGAAGAAGCAGTACCGGAAATGGCGCCCCCGCCCGTACCTCGACCGCCCTCCGTCAGA
CCAATGGAAGTTGACGAGATTCCGGAGCCCGCACCGCCGACCCCCGGTCCCGTTGAGCCT
CCGGATAACACCACGCTGCTGAACAACGATGAAGAATCATTTGCACTTGCACCTGTTGAT
GCCACAGTACTAAAAGGAATAACAAAAACAAAACGCAAACGTAAGCTTATCGTGGATGAA
ATAAAAAACATATCGGGCGAAGAAATGAAAAACCAACTGAGCAACACTTCCGATATTGTA
ACAACATTAGATCTTGCTCCCCCTACTAGGCGTCTTATGCACTGGAAGGAAACTGGGGGT
GTTGAAAAGCTATTCACATTACCAGCTAGACCGATCCCATCAAGAGTTCTGTTCAAGAAA
TACCAGCGCAACATGACCTTGCGCAGTGAGGCAGAAGAAGAGGCCAAGTCACCAGACCCG
GAACCCAGCGTCGTGAGACGAGGCGGACGTAAACGTAAACATGAAGATCATTTACCGCCC
CCGGATACACCAGCGCCTCAGCCCGTCGAACTGGAGGCACCCACTCCAATGCCGCACGAA
TATGAACCTTCAGTCGGTGGCATAATGTCGTCCTTGGGTCCGTTGACTCCGGGAGGGCTG
GGCCCACTTACTCCGGGCACATTATTACAGGCGGCACTCACACCACCTTCATTAGCGCAT
GGGTCGCTGACGCCAGGTGGTCTGCAACATGGCGGAATGACGCCGGCGGGGTTACAACAC
GGCGAAAACCATTCCGTAGAATTGGGCTTGCCTCCTAGTGGAATGACCCCAGCAGGCTTG
CATCATGGAGGAATGACGCCAGGATTGGGTTTGGATAGTGGAATGACTCCAGCGGGCTTA
GTGCATGGAGGTCTTACACCCGCTGGCTTACACCATGGTGGTATGACGCCCGGAGGGTTG
GAACACGGTGGCATGACACCAGTAGGGTTACAGCACGGTGGAATGACCCCGGCCGGCCTG
CAACACGGCAGCATGACGCCGGTCGGACTCCAACACGGAGGCATGACGCCGGCCGGACTT
CAGCACGGAGCCATGACGCCTGTGGGGCTGCAGCACGGCGGTATGACCCCGGCGGGCCTG
CAGCACGGTGGTATGACGCCGGCAGGGCTACAACATGGCGGCATGATCCCCGCAGGCGTG
TCGTCGGGCGCGCTGCTGCAGGTGTCGGGCGAGGTGCCGATGATGCCGCAGGTGTGCGGC
GCGGAGCCGGTGGCGGCGCTGGGGTCGGGAGATCGGAAGAGCGTCG
(2386 bp)

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