SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24411_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_II_polypeptide_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0005737 C cytoplasm
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010467 P gene expression
GO:0015630 C microtubule cytoskeleton
GO:0031047 P gene silencing by RNA
GO:0035019 P somatic stem cell population maintenance
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
GO:0050434 P positive regulation of viral transcription
Transcript
Level		FPKM:14.79 TPM:7.70
ORF EntryO_BomoMSG13586_complete:A_BomoMSG_c24411_g1_i1
Sequence
(Nucleotide)
AATTTGGCTAACAAGTTGATTGTTTGGAAGTGTTATTCGTTATTTATTTTGTTATATATT
AGATGGTGTTAGTTTCATTAAAAAGAAACCTAATTCATTAAATTAGATTTAAGAAACAGA
AAATGCCTTACGCAAATCAACCCTCTGTTCACATAACAGAACTATCTGATGAAAATGTAA
AATTCGTTGTGGAAGATACCGAATTAAGCGTAGCAAACAGTATGAGACGCGTATTTATCG
CTGAAACACCAACAATGGCCATCGATTGGGTACAGTTAGAAGCTAATTCCACCGTTTTGA
GCGATGAATTCTTAGCACACCGCATCGGTCTCATTCCGCTCATATCAGACGACGTTGTAG
ACAAAATCAGGTACTCGCGTGATTGCATGTGTGTTGATTTTTGTTCCGAATGCAGTGTCG
AATTTACATTAGACGTAAAATGCACAGATGAACAAACAAGACATGTAACAACTGCTGATT
TGAAATCGAGCGATCCTAGAGTTGTCCCTGTTACATCACGACATAGAGATGAAGACCAGG
CCGATTATGGTGAAGCAGATGAAATATTGATCATTAAGTTACGCAAGGGTCAGGAATTGA
AGCTTCGGGCATATGCAAAAAAAGGTTTTGGGAAAGAGCATGCAAAATGGAATCCAACTG
CTGGTGTGTCCTTTGAATATGACCCTGATAATATAATGAGACATACGTTATATCCAAAAC
CAGATGAATGGCCCAAAAGCGAGCACACTGAACTTAATGAAGATCAGTATGAGGCGGACT
TCAACTGGGAAGCGAAACCAAACAAATTCTTTTATAATGTAGAATCATCAGGAGCTCTTA
AACCAGAGAATATTGTATTAATGGGAATAGTTGTACTGAAAAACAAATTACTGAATCTTC
AAGTGCAGTTAGCGCAAGAGGCACAAAATGATGCCTTAGCAATTAATTGATTTCATAAAA
TCTAATATTACAATAAATTTAATTAGATAATAAAAAAAAAAAAG
(1004 bp)

- SilkBase 1999-2023 -