SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24391_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		myosin-IB_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
Transcript
Level		FPKM:5.18 TPM:2.70
ORF EntryO_BomoMSG13530_5prime_partial:A_BomoMSG_c24391_g1_i1
Sequence
(Nucleotide)
CAGCTTCGAGCAGTTCTGCATAAACTTCTGTAACGAGAAGCTCCAGCAGCTGTTCATCCA
GCTCACGCTGCGGCAGGAGCAGGAGGAGTACCTGCGGGAAGGCATCGAGTGGGAGCCGGT
CGAGTACTTCAACAATATCATCATTTGCGACCTTATCGAAGCCAGGCATAAGGGTATAAT
ATCAATACTGGACGACGAGTGCCTTCGTCCCGGGGACGCGACAGACGCGAGTTTCCTCGA
CAAGCTGAACCAGCATCTGGACGGCCACCAGCACTACAAGTCCCACCGCAAATCCGACAC
CAAGACCCAGAAGCTGATGGGCCGTGATGAGTTCTGCCTGGTCCACTACGCCGGCGAAGT
GACTTACAACGTGAACACCTTCTTGGAGAAGAACAACGATCTCCTCTTCCGCGACATCCA
GAGCCTGATGGCGTCCAGCGACAACACCATCGTCGGCTGCTGCTTCAAGGACTACAACTT
GAGGAGCAAGAAACGTCCGGAGACCGCCATCACTCAGTTCAAGAATTCTCTGAACGACCT
CATCAAGATCCTCAGCAGCAAGGAGCCCTCGTACATCCGCTGCATCAAGCCCAACGACTT
CAAGGCGCCGATGCAATTCGACGACAAGCTGGTCTCCCACCAGGTGAAGTATCTCGGTCT
GATGGAGAACCTCAGGGTGCGGCGCGCCGGCTTCGCTTACAGGAGGACTTACGAAGCGTT
CTTGGAAAGGTACAAGTGCCTGAGCGCGGAGACGTGGCCCAACTACCGCGGCGCCGCGCG
GGACGGCGTGCAGCGGCTGGTGGAGGCCCTCCAGTACGAGAAAGAGGAATACAGGATGGG
GAATACGAAAATCTTCGTTCGATTCCCGAAGACGCTCTTCGCAACGGAAGACGCCTTCCA
GATAAAGAAGAACGACATAGCCACCATCATCCAGAGCAGGTGGCGAGGTTACTACCTCAG
GAAGAGGTACCTCCGAATGCGGAACGCGGCCATCGTCATCCAGAAGTGGGTGAGGAGGTT
CCTGGCCCAAAGACTCAGGGAGAGGAGGAGGAAAGCCGCTGACGTCATCAGAGCTTTTAT
TAAAGGCTTCATCACTCGCAACGGTCCGGAGACGCCAGAAAACCGGCGATTCCTCGGCGT
CGCCAAGGTGCACTGGCTGAAGCGTCTCTCGGCGCAGCTCCCAACCAAGCTGCTGGACCT
GTCGTGGCCGCCGTGCCCCTCCACCTGCCGAGAGGCCTCCGAGGAGCTCCATCGCCTGCA
CCGGGCCCACCTCGCCAGGAAGTACAGGCTGGCCTTGTCTCCTGACGATAAGAAGCAGTT
TGAGCTGAAGGTCTTGGCCGAAAAAATATTTAAGGGTAAAAAGAACAGCTACCTCAGCAG
CGTCGGGGAGAGGTTCGTGAACGACCGCATGAGTCCCGAGCACAGGACCTTGAGGGACAC
CTTCATGGCGTCGCCGGCCTGGCCGAGCGGCGAGGAACTCATCTACTCGTGCGAGGCGAT
GAAGTACGACCGCATGAGTCCCGAG
(1525 bp)

- SilkBase 1999-2023 -