SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24305_g1_i2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:15.63 TPM:8.13
ORF EntryO_BomoMSG13354_5prime_partial:A_BomoMSG_c24305_g1_i2
Sequence
(Nucleotide)
GTGCGAGGCCGCCGCGGCGCAGCACGTGGGCGCGCGCCTGGCCGCCGCCGCCCGACACCT
CGACACCCTGCAGCGGAAGCTGGACCACAGGAAGGCCGAGCTCGAAGCCGCGCTCAAGGA
CGGCCGCAATCTCGAAGAGAACGTCGCCCGAACCCTCGGCTGGCTCCAGTCCGAGCTGGG
CTCGCTGCCGAGCCGCCTCCAAGTGTCCGCGGACATCAACAAACTGCAACAACAGATACA
GAAACACGAGCCCCTCTACAGAGATCTCACTCAACGGGAACACGAAATTATTATGTTGAT
TGATAAGGGCCGTGAAATGGAAAAGAAACCTTCTCACCAGAACTTAAGGAAGGATCTCGA
TCGTATACAAGCTCAGTGGGACAAGCTGAAGCGAGAGATTGTCGACAGAAACACAAGACT
ACACACCGCCATGGAACATTGCCGTAAGTTCCACAAGTGCCAAGAGTCGTTCTTGCCGTG
GCTGGCAGACACAGAGGAACGCATCGCCAAGCTTCCTCCGCCGGCATTCTCCAAGAAGGA
AGTTGAGAAACAACTTAGAGAACTGCAACACATCCGAAACGACATATGGAAAAGGGCCGG
AGAGTTCGAGAACAACAAAACTCTCGGTGAGACTTTCATTTCGTCGTGTGACGTCGACCA
AGACGTGGTCCGAACGCAAATCGACAGCATGAAGGAAAGATGGGACAAGATAAACAACGA
GGTTCTCCAGCAAGTGGAGTTCCTGGAGACGACGAGCCGCATGCTGGGCGAGGTGCTGGA
GAAGAGCCGCGGCGTGGAGACTCCGCTGCAGCGCTGCGAGGAGCGGCTACGGGACGCGCA
CGCCGCGCCGCCCGCGCTCGCCGCGCCCGCACTCGCCGCGCTCGCCGACCATCTGCAGGC
CCTGTGCGCGCCGCTGCAGAGCGTGGAGGTGGCAGTAGATGACATAGTGACGATGGCGGA
GGAGCGGCTGGGCCCCGAGGGCGGAGCCCGGGCCCGCGCGGCGCTGGAGGAGGGCCCGCG
CGCCCTGGCCGAGCGGCTGCACCGGCTGCAGGACCAGGCCGACCTCGCACGCACCAGGCT
CGCGGGCGCCACCGCCGCGCTCACTCACTTCCAGGACAAAGTGAAGAGTCTATCGCACGA
CCTATCGGACCTGGACAAGGAGTTGGACTCGATGAAGCCGCCGGGGCGCGACCTCAAGAC
CGTGAAGCAGCAGCTGGAGGACGTGGCGCGCTTCTACAAGCGGCTGGAGGGCGCCGACGA
CCTCATCGCGCAGGCGGAGCGCGCCGCCGAGGGGCTCGCCGACAGCGGCTACACCGCAGA
CTCCGCCAAGACCAGGGACCAGGTGGAAGGGCTCCGTAAGCAACTGGCCAAGCTGGACGA
GAGGGCTCGCTCTAAGGAGCAGGACCTCGATGACACCCTCAGCAAACTGGAAGCCTTCTA
TAAGGCTTACGACTCGGTCATGGATGACGTACAAGAGGCTTCGGAACAAATGAGAAGTCT
GAAGCCGGTGTCGTCGGAAGTCGACCAGATCCGCGCCCAGCAGAAGGACTTCGCCGAACT
AAAGCGTCACACGTTCGAGCCCCTGGGACAGAACGTGACTCACTGCAACAAGATCGGGCA
GGGGCTGGTCAGGTCCGCTCTGCAGGGAGCCAACACTCAGCTGCTAGAGAAGGACCTCGA
GAAGATGAACGACAAATGGAACGCTCTGAAGGAAAAGATGAACGAACGCGAGCGGCGCCT
GGACGTGGGGCTGCTGCAGTCCGGCAAGTTCGCTGAGGCGCTGGCCGGCCTGGACAAGTG
GCTCGCCGACACCGAGGACATGGTGCGCAACCAGAAGCCGCCCTCGGCCGACTACAAGGT
CGTCAAGGCGCAGCTACAGGAGCAGAAGTTCCTGAAGAAGATGTTGATGGACCGTCAAAA
CTCTATGTCGTCTCTGTTCGCGATGGGCAACGAGGTGGCTGCCGGCTGCGAGCCTCAGGA
GAGAAAGGCCATCGAGAAACAACTCAAGGGCCTGGTGCAGAGGTTCGACGACCTCACCAC
CTCCGCACAACAGAGGATGCTGGATCTGGAACAGGCTATGAAGGTAGCAAAGCAATTCCA
AGAGGAGCTGCAGCCCCTGGTCGAGTGGCTGGGAGTGTCAGAACGTAAAGTCAAGTCCTT
GGAACTGGTGCCCACTGATGAGGAAAAAATACAGCAGAAGATCAGAGAGCATAAGGCCCT
CCACGACGACATCCTGTCGAAGCAGCCGGCGTTCAAGCAGCTGACGGAGACAGCCTCGAC
CCTGATGGGGCTGGTCGGGGACGACGAGGCCACCGCGCTGGCCGACAGGCTGCAGGCCGC
CACCGACAGATACCAAACTCTGGTGGATCATAATTTGAACGTAGGCGATCTGTTGGAGAG
CTCTCGCAAGGGGCTGCGGCACCTGGTGCTCACGTACCAGGACCTGTCCGCCTGGATGGA
CGGCATGGAGCAGTACCTCGCCAAGAGGAAGCTGCTCCCGGTCCATATGGAGAAACTGCT
CCGGCAAATGGACGAATTGGCTGAGAAAACGGAAGAAATAGCCGTGAAGCAAGAAGCAGT
CGACAGCACCGTGGACTCGGGCCTCGAGCTCATGAAGCACATCTCCGGAGACGAAGCCCT
GCAGCTCAAGGACAAGCTGGACGCCCTGCAGCGCCGGTACAACGACCTCACCAGCCGCGG
GGCCGACCTGCTCAGGGTGGCCTCCGAGACCCTGCCCCTCGTGCAGCAGTTCTACAACAG
TCATGCCAAACTAACGGAATGGATGACGAGCGCGGAGACGTGCCTGCAGTCGGTGGAGCC
CCGCGAGGAAGACATCCTGCGGCTGGAGGTGGAGCTGCAGGAGTTCAGGCCGGTGCTGGA
CACCATCAACTCCGTCGGACCGCAGCTCTGTCAGATATCGCCCGGAGAGGGCGCCACTCA
CATCGAAGGAATCGTGACCCGCGACAACAGGAGGTTCGACGCCATCGCCGAGCAGGTGCA
GAGGAAGGCCGAGAGGCTGCTGCTCAGCAAGAAGCGTTCCCTGGAGGTGGTGGGCGACAT
GGAGGAGCTGGTGGAGTGGCTGCAGATC
(3088 bp)

- SilkBase 1999-2023 -