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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24179_g1_i2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		protein_phosphatase_1_catalytic_subunit_[Bombyx_mori]
Ontology
GO:0000164 C protein phosphatase type 1 complex
GO:0000781 C chromosome, telomeric region
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005979 P regulation of glycogen biosynthetic process
GO:0005981 P regulation of glycogen catabolic process
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0008157 F protein phosphatase 1 binding
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019433 P triglyceride catabolic process
GO:0030324 P lung development
GO:0032403 F protein-containing complex binding
GO:0032922 P circadian regulation of gene expression
GO:0042587 C glycogen granule
GO:0042752 P regulation of circadian rhythm
GO:0043005 C neuron projection
GO:0043021 F ribonucleoprotein complex binding
GO:0043025 C neuronal cell body
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043197 C dendritic spine
GO:0043204 C perikaryon
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0070688 C obsolete MLL5-L complex
GO:0072357 C PTW/PP1 phosphatase complex
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
Transcript
Level		FPKM:25.01 TPM:13.01
ORF EntryO_BomoMSG13095_complete:A_BomoMSG_c24179_g1_i2
Sequence
(Nucleotide)
GTGTTTCTGTCTAATTTGCTTGTGTGAGTGATGTCTCCGCCATTGAAAACCATTTTAGCC
GAGAATTGAAATAGGTTGTACCTTTCATAATCGGCAAAAATCTTAAACATCTCTCTTCTT
TTACCTATTCTATTCAACCATATTTCGTACACATACAATATATCCGATGGCAGACAGAGA
CACAGATGAGTTAAACATCGATAACGTAATAAAAAAATTACTAAAAGTACGAGGTGAGAA
GCCTGGTATGAATGTTCAGTTGACGGAAATAGAAATTAAAGGGCTATGTTTGAAATCAAG
AGAAATATTCTTGTCACAGCCTATACTACTTGAACTTGAAGCTCCTTTGAAAATTTGCGG
TGACATACATGGACAATACTATGACCTCTTAAGGTTGTTTGAGTATGGTGGCTTCCCTCC
GGAGTCCAACTATCTCTTCCTCGGAGACTATGTGGACCGTGGCAAGCAGTCGTTGGAAAC
AATATGCCTGCTCCTCGCCTACAAGATTAAATATCCCGAGAATTTCTTTCTTTTACGCGG
AAACCACGAGTGTGCCAGCATCAATAGGATTTATGGGTTTTACGATGAGTGCAAAAGGAG
GTATAACATTAAACTATGGAAGACGTTCACAGACTGCTTCAACTGTCTTCCCGTTGCGGC
GATAGTTGACGAGAAAATCTTCTGTTGTCACGGCGGTCTGTCGCCGGACCTGCAAGCTAT
GGAACAGATCCGGCGGATCATGAGGCCGACGGACGTTCCCGACCAGGGTTTGCTCTGCGA
CTTGCTCTGGTCCGACCCCGACAAGGACACGGCCGGTTGGGGCGAGAACGATCGCGGAGT
CAGCTTCACTTTTGGAACCGAAGTCGTGGGCAAGTTCTTGTCCAAACACGAGTTCGACTT
GATCTGTCGCGCGCACCAGGTCGTCGAGGATGGATACGAGTTCTTTGCGAAGAGGCAACT
CGTCACACTCTTCTCGGCACCAAACTACTGCGGGGAGTTTGATAATGCAGGCGCCCTGAT
GTCCGTGGACGAGACGCTGATGTGCTCGTTCCAGATCCTGAAGCCGGCCGACAAGCGCAA
GCTGTACTCGGGCCTCAACATGGGCCGCCCCAACACGCCGCCGCGCGCACAGCCCAAGAA
CAAGAAGAATTAATGGCCCCACACGCGCGCCGTCCGCCGACACACGCATGGACACCCCTC
CCTCACCGCTGTACACTTAAAATACCTTGAACGGGTTGATGTTTTAGTGAATCTTTGTTT
CCTTAATTGAATGCATGAGCGTTAAAGTCTGACAACCCAGCAACCTCCCATAAAGACGGG
CAGTTGGCCTAAAGGTCCTAGATACCAGGCCATAAACTCGAAAAAAAAAAGACGGGCAGA
GATTGCGTCTAAACGATATCCAGTAACAGAGAGACATTTGAATAATGGTAGTTGCAGTTT
TCAGTTAAAAATGCATTCAGGGTTTCGGAGAGCGAATCCGGTCTCTCAGATTCGCTGTCG
AGAAAATGAGTGTTAAAAATTCGCTTGGCCCCACTTGAACTGTCCGCTAGTGAAAAGGTC
TCTGGTCAACGGCCCCTAATGCGGTCAGGCTAAGAGAGAAAAAAAAAACAATCCAATATT
ATGTTTCACAGAAACTTGCAGTAAAATTGACTCTATGATCAAGTTTAGTTTTCTTTTAAT
GCTATCAAAGAAATCAAACACATGTCAGATTCAATAATATCTAATAGTTGTTACGCACAA
ATTACGATGGTTCCTTTTGTTTTGTTATTTAATTTGGTAATCTTAAAATTGACTCCGAAG
TCGGGGAACTTATTTCGTAAAAAAAACTAACAAAACGTTCACAATCGCCCTTAAACTTAT
TTTTGATATGGGGATAATAAATTCATCTAAAACATCAATTCATAGAAACGATCGTCGCAG
AAACGTGTTCCAATTGATATTTCATCAAAGCAATAATAAAAAAAAAAAAAAACCGTCCTT
TTACAATGACATGACTTTAAAAGTTGGCTGTACGAGACAATATACCTTTGCGATGTGTCT
ATTTGAATTTGAAATGAGTGTTGCCGGTAGTGTCAAATGAAACACGTTTTGATAGATCTT
TATATCATAATTATTCCATTGTTTTCTCTTTGTTTTTATGAAAATAAAATTTGTAGCATT
CAATCAAGTATTAATTAAACAGCGTTATTAATCGCTCTCTTCGTATGTTATTTTAGAATT
GGTCACACCGTAATTGTAAGGTAACATTTTAGATGTTTACGGAAAATGTAAAAAAAAAAA
ATGTTGCCAGTTTCATTTATTTTTTTAATTTGTGCAACAATTTTCATGTTTACAATTGTT
GGAAAATTGTTACGCCTTTTTCTCCGCTTAATCTCGATCAGCCGTGTAAAGTGATTTTAC
AGCTTCCTTTTTTATTAATTAATTTATGTGACATATCTTATTATGTATTTACCGTGCGTC
TTCTGTGCGTGCGAATGTCAGTTTGATTGATCCCGTATGCTTGTATTCGAAAATAATAAA
TTCTGTTAATATAAGGTATCAATGTCCACATTTGTATTATTATGGCAACACTAGTCGTTA
TAATACAATGACAATCTATAAAACACATGGCGGTATATAGAAGATTTATGAAATTTCCTC
TACTTGAATGTAATTGGTAAACTATTTTAATATTTAAACTTCAGTTGGATCGGAATACAA
ATTAAAATAATTTGAGAAGGCATTTAATGAAAAGGCGCTCAGACACACCACACTTAATTA
AACACATATGTACATATTATAATATGATAAAAGGAAATATCTTGGTTCCTTTTCTTGTAT
TATGTATGAAGATTTACTGAGTAAAATATTTAAAAATAATGTAAGATTTTGTAGTAAGCG
AAAAAACTGTAAGTTTGCAACGCGCGCAGGCGGCGATGCATTTGGATGGGAGTGACCAGT
ATATAAACATATATATTATATATGTGAGCACACCGTTCTTTAAACGGATGTTAGTACTTG
TTCTTTATCGCGTGCTTTGGTTTTGCTTATTTTGTGTCTATAAACAAATTCAAGAATCAT
GTGTGTGTTTTTTTATTATCTCAAAAGACTTGGTTTGACGATGATTGATGTTAATTTTGT
TATTAAATATCTAATTTTGTTGATAATCGAAAAAACTATGCTTTGGGGAATTCGATTAAG
ATTTTTTAATAGAATTCCCGTGAAATTGTTTCAACTCTGATATATTAATAGTATTTTTTT
GGCAATACAAATACGATATTGCTTGGGTGAATTGGGGGAATAGATTGCATTGGTCGCGTA
GCCTCATTCATAGATGTTTGATTTCGACGCTGCCTTGTAATCAGATTATTACATTCACGA
GGTTTTCAGCTCTGTAAACTGAAGATATTGTTTAGAAATTATGATGGTCCTCAGGATTTT
TGCTAAATCATCAATTTTGAAGAAAACGATTTTTTCAGTGATCTCTACATCAAGGCAATT
CACGTTTTGTAACATTGAAACAAAATTGAATAAATAAATAAAAACTAGTGAAGACGTGTG
CACTTTCATACGCGACTAAGTTTACCATTGAAATATACCAAAATGGTAATTTTTAGAGAT
TCGTATGTTAGGCATAAGTGGAATCTCATCCATTCTTCGCTGGTCAATGACCACTGTATC
ACTGCGCCCGGTATGGTGTGTCTTTGTCAAAGATACTCTACAATCAAGCTCCGGGTTATT
ATTATTAAACCACTTCTTGCCACAAGAGATTTCTCGGCCCTCGGTGTGGGTAATTGAAGT
TACTTTTTCTCCCGGGTTCCTTTCGATTTGGTCAAACAAGTATTTTTTTAAATTGGGAAG
CCTTAAAATCGCATTTATCGATTTATTTTGACGAACGTATTATTATTTAACGAGCAAAAC
CAAAGTACTTTATAAATAACAAGGATTTAGAAAAGCTTTTGTGATGCGTCTTGTCTTAGC
CGACCTGAAGATTTGTAATTTAAAAACGCACAGTAATGCTGATTCTTGCAAATGGTATAA
TTAAAAGTACTTATTAAATGTGTTTGAAGGTAGATGAAAATGAATATGTTTTGGAACATT
GCTGGCGACTGTTTTTTTTTTTTTAATGCAACAATCACCATTGCTGTGCCATTCCACCGA
TAGTGTTACCAGATTGAAGAGAAAAATGGGGGTTGTGTTAAAATGGCGTTTCATTGCGTA
CTCACTCGATGTTTTTATTTCATTGCTGCCCGCGTTAGACTGAACCGGTATCCCATCACT
GATGTGTTGGTTTATGAACAGAATTGTATAATAATTTTCTTAAATAAAATACTTTAAAAT
TTAAAAAAAA
(4330 bp)

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