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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24178_g1_i2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		UPF0505_protein_C16orf62_isoform_X2_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0030904 C retromer complex
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:13.84 TPM:7.20
ORF EntryO_BomoMSG13092_complete:A_BomoMSG_c24178_g1_i2
Sequence
(Nucleotide)
GGTGTACAAAGTACAAAGGGTAAAACAATGCCAACTTTTGAATGGAAATCAAAAAACCAA
AAACGGATGATTTGCAAAGCACTTAAATTTGAAGTCTCTCATCATCCTCTGAAGACAAAT
CATGTACTTTTTAAAAAAATCTCAAACAAAGGCTTCATTGATGACTTGAGTAAATGGAGT
GCTGGCTTTGAAGAAATAGATCCACTGCTTAAGTTTGAACAGATGGCTTTAGATGAAGAT
CTTGTTCATGCTGACGATGAGGGTATAGGGGTAAATTATGCAAAAGAATGGAATACAAAA
CGTACAATAGTCCTCAATAGATACACAACTGGAGAGAAGCTAACAATAGTCAGTAGTTTT
TTGCCTGGTGGTGAGAAAACCCTCATAAGACAGGTTTCAAATTTGAACGAAAAAGTTAAA
AATAGACTGGAGCAATTGGATGATTTTGATGATGATTCAGTGAGGAAAACAATGGGTTTG
AGCCAACAAGAATTTGTTACCAAAATAAATATGTTGAATGATGAAATTAAGAAGGCATGG
GAGTCTGAGCAAAGAGTTAAAGCTTTTAAAATAGGGATCCAATGTTCCAAGCTACTGTCA
GATGTTAATGTCATGCACTTTTATCCGAGCAAGTTCATTCTCATCACCGATATCCTGGAC
ACATTCGGTAACTTAGTCTTCGATAGGCTCTGTGAAAAAAGTTTTGGGCAAAAGCTTGTG
AAGCCTGTTCAGGATATCAACCCGAAGGAAGTGCCGGAAACGGCGAGAGAAACCTGTCAG
AACTGGTTGTATAAGATGGCATCGATTAGAGAGCTTCTGCCGCGCCTTTACATGGAGATG
GCTCTGTTGAAATGCTACTCGTTTACATCGAAAGAGGAAATAAAACCGACAATCGTGAGA
CTGACTGCGATGATCAGAGGGATAGGAAATCCCTTAGTTGCGATCTATTTAAGGGCATAC
CTCTGTAAGGTGGCGTCTAAATTATTAGGAAACGAGTGCTCTGATTATTTTTATGAAAAT
TTGAAGGAATTTATTGAGGAGTATCAACAGGTTTATCATGTGGCCATGAAAAAGAAATAC
GAAGGACAATTACTTACCTTAGATAAATATTTAAACATTTACATGCCGGCCGTTGATTGG
CTGTTTTTTGGAACTTTGCATTCTACCAACTGCAAGGAAACACTTTTGGATCAAATGCTT
CAACAATGTCAGAAAATGCAAAACAATGAATTGCTCCTGTGTGGTATTCTGTCTGCATTT
GATTCGAAAATTATAATTAAAAGGTCTACAAAAATACTAGATATGATTGTGGAATCTGCC
GATAAAATGGTACTGGTCCATGACGTGTTGACTTCGCTCGGCGAACATTTATGTGCGTCG
GAAAACTGCCGACAAGTCAATTCAGAGACACTGATTCAAACTTGGTGGAAGATAGCCAGC
AACATAAGGTCTACTGTGCACTTTTTGCAAGTTTTGGGACCGTGGCTACAATTCGCTTGT
ACAAATTTATCGACCCAGCATGTGAATATAATTCTGCGTGGAACAATACGTTACCTGATC
AAGTGCGGGAAATCGGCTGACGAATTTTCCGGCAACTTACAGATTGTCATCAAAAGGATG
CTCGGATCAGTTCCGGACATCGAGGAATGTTTTCTGATGGATGCGTTTATGCCGCTCATA
GAATTGGTACAGACGACGAACGCACGTACCTTAATGGCGAAAACGGTGTTGTCAACGTTC
TTTACGCGGTATAACTCTCTTCACATCGACGACCATATTGTTATAACCTCACTGATGTGC
CTCTGCTGCACCCTCCACGATTCCATAAATGCTATAACGGTAGATGATGAAATAAAAGTG
TGCAGCGAACTCATAAACAAGTTCGTCCACGCGGGCACGTTCCACGACGACTTCGAGCAG
CAGTTGAACTTCTACGTGGAATGTAGATCCTCCTTCATTAAACTCGACGCTGTACTCGTT
GCTCTAGTGCAGAAGGTAAATGGTTTAGCGATACGTGCCGGCGACGCACGGAACAAATGG
CTGCAGAGGGCGTGTGCGGCTTATTGCTACATCACGGTCCCTTCTCTGCACTGCACCATC
ACTAAGGCACAGCTGTACCTGCTCTCTGGACAAGTCGCCTTGCTCAACAACTGCATTGGA
CAAGCGGAAGCAAATTTTAAATCCCTCATAGGCTTGATACCAGATATTCCGGAGTACATT
CTAGAAGACGGACAAAAAAAATCAACCAATGTCAAAGTTGAAGGAATATTGCGCGATTTC
TTATCCACACTTCTTGTTTTGCCGGACAACGTGGACAGTAACTGCAAAGCGTACATACTG
AGCGGACTGATCAAGACAATGGAGAGGGTGCACTGGCGTAAAACGGACCCGCGCTACTAC
AACACGCTTTTGAACATTCTAGATCTGCTCAGCGAAATGGCGCAGGAGGATTACGCACAT
CACATCGATTCCGTTCTATCAAACGACAAGCTGTATGGTTGCGACGAGGAATTCGTTTCG
GTCTTAGACGGGTATGCGACGGACATATGCCAGGAGTTGCTCGTGGTACTGAAAGCGCTC
GGCGACAACAAAGAGACAAAGAAACAGTACAATTTGACGTTGGAATTATTCTGGCGCGTG
ATAAGACGCGCCGATTTAGAACAACATTCCATGCTCACTTTAGCGGCCAACTTGTGGATG
CTTTCAAAGAAAATACAAGATCCCAATAATAAACTCGCAAAAAGCATTCTTTCCGCGCTA
CGCACCTCTGAAGATCTCGCAAGTCGACAGCTGCTCGAGAAGTTAGAACAAGGTGTTCAA
ACCTGAAACAGATTATCCTAATGACTACATGAAGATATGATATACATCTAAACATTCCTA
CAATCTGTTTACTATTCAAAATACACGAAATCTGATTAGACTATTGTTATTATAAGTTTG
ATTAAATTTCAACATTTTATTTCCGAA
(2967 bp)

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