SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24142_g1_i2
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		THO_complex_subunit_3_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0000445 C THO complex part of transcription export complex
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:0.34 TPM:0.18
ORF EntryO_BomoMSG13010_5prime_partial:A_BomoMSG_c24142_g1_i2
Sequence
(Nucleotide)
AGATCGGAAGAGCGGAGAGGAGTAGATTGAGTCAAGATTTTATTTTCAAAGGCCACACAG
GCTCTGTAGATCAACTCTGCTGGCATGCGTCACATCCTGATCTCCTGAGTACAGCGAGCG
GAGACAAATCTGTTAGGATATGGGATACACGATCACACAAATGCGCGGCGACAATCCCAA
CCAAAGGTGAAAACATAAATATAGCATGGTCTCCTAATGGCAACACCATTGCGGTAGGGA
ACAAGGAAGATTTAGTTTCATTTATCGATACAAAAACTTATAAAGTGGTAACAGAAGAAC
AGTTTAACTTTGAAGTGAACGAGATATCATGGAATAATACATCGGACTTGTTCTTCCTCA
CCAACGGACTGGGATGCGTACATATTATGACTTATCCATCTCTAGAATTGCAGACAGTAC
TGAAGGCGCATCCTGGTACGTGTATCTGCATCGAGCACGACCCAACCGGTAGATACTTTG
CTACTGGGTCAGCCGATGCTCTGGTCTCACTATGGGATGTCAATGAACTGGCCTGCTTAA
GAGTTTTCTCCAGGTTGGAGTGGCCGGTCCGGACGCTGTCGTTTAGCTTCGACGGCAGGC
TGCTGGCGTCCGCGAGCGAGGACCACATCATCGACATCGGAGACACGGAGACAGGGGAGA
AAGTAGCAGAGATCCCGGTGTCCGCGTCCACGTTCACGGTGTCGTGGCATCCCGCGCGCT
ACCTGCTGGCCTTCGCCTGCGAGGACAAGGAGCCGCCCGAGAGGAAACGGGATTTGGGGA
ATCTCAAACTGTGGGGACTCTCTAGTTCTTAGTGTTGGAAATGTAATATACAAAATAAAC
TAAAATACTAAAAAGGATTGTGTGGTTTTATGA
(873 bp)

- SilkBase 1999-2023 -