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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24140_g1_i6
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		heat_shock_factor-d_isoform_X4_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:20.33 TPM:10.58
ORF EntryO_BomoMSG13002_complete:A_BomoMSG_c24140_g1_i6
Sequence
(Nucleotide)
GTTACGTAAAAATTGCGTTAGTGTGCGTTGTAATCTTTTCGGAATATTTTAGTTGTGTGT
GTTTATAATTAAAATGGCGATCTGAGCAGTGTATTGCCGAACTTGATAATTTTCTTAAAA
AATACCGTGAGATAATTTGAAGACTTTACATTTTATGTGATTTCAGTAGAATTTATTTAA
AAAATGCGTTCCGTTGTCGAAATTGGGGCAAGTGTCCCTGCGTTTCTTGGGAAACTGTGG
AAATTGGTTAATGATTCTGAAACAAATCAATTGATATCTTGGAGTCCGGGTGGAAAGACG
TTTGTCATAAAAAATCAGGCAGATTTTGCTAGAGAACTTTTACCACTGTACTACAAACAC
AACAATATGGCAAGTTTTATAAGACAACTTAACATGTATGGATTTCATAAAATAACATCT
GTTGAAAATGGCGGCTTGAGATATGAAAAAGACGAAATAGAGTTTTCGCATCCCTGTTTT
ATGAAAGGACATGCATATTTGTTGGAACATATTAAAAGAAAAATTGCAATTCCAAAATCT
GTTGTAACAAGCAATGAAAGTGGTGAAAAAATTTTGTTAAAGCCTGAGCTTATGAATAAA
GTTTTAGCTGATGTGAAACAAATGAAAGGAAAACAAGAAAGCCTCGATGCCAAATTTAGT
GCAATGAAACAAGAGAATGAAGCACTATGGAGAGAAGTCGCTATTTTGCGGCAGAAGCAT
ATCAAACAACAGCAAATAGTGAACAATCTCATTCAATTTTTGATGTCATTGGTGCAACCA
GCAAGACCCCCTAATACTAACGGCAATAATGTTGGAGTCAAGAGACCATATCAGTTGATG
ATAAATAATGCCGCTCATAATTCTGCCACTGAAAGCTCTTATCCAGGAAGATTAAAAAAT
ATTAAGCTAGACAAGGATCCTTTATTGGAGGAGATAAGTGATGAAAATTTGGAGGATGGA
CCTACAATACATGAATTGGCACATGATGACATACTGCAAAATGAATCCTCCCAAGATGCC
ATTGACCCTACATTCTTTGTAGCTACAGATTTGAATAATATCACTGATAATCAAAATGTA
GCAAACCCATTATCCAATATTCAATACCATGTCACCATGGAAGACGGTGATGATATTGAA
TCAGGAGGCAATAAAATCGCATATCCTGTCAAGAGTAATAGACTACGATTCAATGAGGAT
TTGCCAGTAATTACTTCCCCATCTCCAACTCAGGGTAAACCTTCATCACCTTTAAACCAG
AGTCCAGCGATTAATAATGTATTTACGATTACACCAAGCACTTCAAAGACCAAACCTCGT
ATCAAGACTACTAGTTCCAATACTAGAAGCTTAATATCTCCCAGCAGTTTCAACCCGTCT
GCTGATTTTAAGCTTCCAGCTGAAATATTTGCAAGTGATGATTCTGTAAGTGATGTGGGG
ATACTGACTGCTGAGGAAACAGGAATAGAAAATATACTTCAGGATGTTGATGAGGACCCA
ATGGTATCTTCAACTAAAGACAAAATGTTGGGTGGTATTAACATAAAAGTAGAAAAAGTA
AATGAAGGACTTAAACCTTCCAAAAAGTCTAAGAAGTCCAATAAAGACGACACACAGAAC
ATTAACTTAGCGGCAATCAAGACTGAGCTTCAAGATGATTTTGATTGGAACAATATGACT
CTTGCAACAGTGAACAATAATACGAACAACAAAATAAACAGATTCCAAACAAGGAATAGG
AGAGATAACATCAGCAAAAATTGGGAAGAATACTCTTCTCATTTTGGAACAAATTCTAAC
AAGAATGACCTTGACGATCATTTAGACGCAATGCAATCGGACCTTGAATCGTTAAGAGAA
CTACTGCGAAGCGACAGTTATGCTTTGGATACTAATACTTTAATGGGGTTATTCGGATCG
GACGATCCATTTTACGGCTTATCGTACAACCCCGCCGACGAAAGGGCGAAAACATCTAAC
AATGTTGTTGAAGGGAATCAGCTTATCTCGTATACAGGAAATATTCCAGACTTTGAGGAT
ATAAATATGCCAGATTTAGAGAGTGAAAACTCTCAGGAAGGTTGTTTATCACCTGAAGTC
AGCAGCTCGACGCTCAATACTCCTCAGGTGCAGGTCAGATCACCTTCCTTTAATCTCAAA
CCATGAAGCAAGGTTAACTGGAAACACCTCATGAGAAGCGGTCTTCAAAAAAGTGACACA
ATGTCAATTATGAACTAAAGTATAATAGTGATGAGTGTGTTGAAAATAACGGACTAATAA
CATGGGTATGTGGGAAAATGTTCAAGACTGTTCTCAATGTATTATGGGTATATCTTGTAA
TATTTTACCAATACAGCATCTTATATTATTATTGCTTAAACGGGAGATCGGAAG
(2394 bp)

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