SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c24133_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_listerin_[Bombyx_mori]
Ontology
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:1990116 P ribosome-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:8.63 TPM:4.49
ORF EntryO_BomoMSG12985_complete:A_BomoMSG_c24133_g1_i1
Sequence
(Nucleotide)
GGTAAAATCAATTGGAAATGAGAAGATTGTATGTGTCTAATAAATACGTACAAGAATTAA
AGTTACTTTTAACATATTAGCTAAATTAAACGTTTTCAAGTATTTCATTAATTTTTTGAA
CTTAAGAAAACGTTGCTCGTAACTTATTAAACAATAGAAATGGGTGGTAATTCTAAACAA
AGCCAAAGAACCAAAAATAACGTCCGTCCATCCAGCAGTGGGCGCAGTGCAGAACTCCTA
AGCAATGTCAAGCTGGAATCAGGTCTAGTGAGCATTGCAGGAGGAAAAGTTCTTCCAGCA
CTGTTTCCAACACTTACAGTTGCTACTATAGACCAGGAAATTAGTCCAGAATTCCAAATA
TGCATAAAAAAGTTGAACAAAAAGGATCCTATTACAAAGACAAAGGGACTACAGGAAATG
TTGGAAACCATAAACAATAGTAAAGTTGATGATGTCATCACAATTCTGCCAAGCTGGGCA
CATTTCTATAAAATACTTGCCATTGACCCAGACAGGAAAGTGCGAGAGTATACACAGTTA
TGCCACAGCAGCGTGGTGCGCGCGTGCGGGCGGCGGCTGGCCCCGCGGCTGCGGCAGCTG
GTGCCGGCGTGGCTGCAGGCGCGGCACGACGAGCACGGCCCGGCGCAGGCGCACGCCAGG
ACCTCGCTCGCTAGTACGTTCCCCGATGCCAAGCTACCGGAAGTTTTAGCATTTTGTAAG
ACAGAAGTTATGACCCATTTCCTCGATAATCTCATCGGCACCGGTGAAGCCAGCATCTCC
AAAAAAGCAGACAGCCCAGAAGACAAGGAGCAGCAAGTGACCCGCCTCATCAGCAGCTCG
CTCCTCGGCCTGGAGTACTTCGTCCGGCAGCTGCCCGCCCAGCACGACGCCTGGCTGTGG
GCCCAGCTGTCCGCCCTGCT
(920 bp)

- SilkBase 1999-2023 -