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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23925_g1_i1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:21.29 TPM:11.07
ORF EntryO_BomoMSG12636_5prime_partial:A_BomoMSG_c23925_g1_i1
Sequence
(Nucleotide)
CTACATTTCAACGATCTGTTCACTGTTCTTCTCTTCTTCATAATTAAAATACATATGTGA
ATTTAAGTGTACATATTAACTATGCCTGGGATATAGGGTTGTATTAAAATATACGACATG
TGCCTGAAACAATAATATTAAACTCGTTAAGATATGGAAAAACTGCCACCAAAACAGAAG
ATTAACCGGAACGCAACAAGAGAGGAACTTTTAAAGTTGGACAAAAATGATCTCGTCGAG
AAAATAATACAGTTGCAAGCCCATAATACACAGCTGAAAAACATCATAAATAAAACTACA
CCTTGCGATGGCCAAAAGCAGAAAAAAGTAGACCAAAGAGAATTTATGTTTGAAAAATGC
CATTATCGTCATGTCCTCCTAAGGGTATCGTACCTTGGCTGGGAATATCAAGGTCTGGCT
GTACAGGAGAATACAACACAAACAGTAGAATATCATCTTTTTGAAGCCTTGAAAAGGGCC
TGTTTGATACAAAGCCGTGAAACCTCTAATTATCACCGATGTGGTCGTACAGACAAGGGA
GTTAGCTCATTTGGGCAGGTCATATCGATATGCCTAAGGAGTAAACATTCACCGGAGGAA
CAAAACAAACCGAGCTGCATTAGAAATGAGATTCCGTATAGTAAATTGTTGAATCGTCTG
TTGCCCAAACATATAAAGGTTATTGCTTGGATGCCAATACCGCAGGACAGACCGGATTTC
AGTGCACGATTCGATTGTAAAAAACGTTCCTACAAATATTATTTCCCACACTCCGGGCTG
AACCTGCCCGCCATGCTGGAAGCGTGCCGTCACATGATCGGGTCGCACGATTTCCGCCAT
CTCTGTAAAATGGACGTCGGTAATGGTGTATTGGAATTTATAAGAAGAATAATGAATGTT
GACATCGTACCTGTCGATGTTAATGATGTTGACAAACCAACATCAATGTACTATCTGCTG
ATAGAAGGAAACGCATTTCTGTGGCATCAGATACGTTGCATTATGGGTGTCTTACTGCTG
ATAGGAGAAGAAAAAGAAAGACCTGACGTGGTGTTAGAATTGTTGGACGTTGAGAAGAAT
CGGGGAAAACCGCAATACAGCATGGCGTCTGACCTCCCGTTGAATTTGTTCAAATGTGCG
TACGAGATAGAAGATACCAATCGATGGGTGTACGAAAGAGAAGCACTGATCACTCTCATA
TCTGATCTGAGAACGGAATGGACTATGCACGCCGTCAAGACAACGATGATTCAAGATTAC
ATACGCGAGCTAGAAAAGGTCCCTCTGGCGAGCGAGACGGAAGACAGGGCCAATGACGAG
TGCGAGCAAGATGAAATCGCATCGTACGCGGCGTGCTTGCTGCAAGGGGTGAAACCGAAA
AATTACACTCCATTGATGAAAAGACCCACATGTTCAACGCTACACGAGAAGATTGCGCAT
TACAAGAAGAGACGGAAGATAATAACAAGCTAATAATTTCAAGGGTCATTAACTCTAGAA
GAGGCATTTTTTGCATTTTTATAATAAAAAATAATTTTGATCGGAAAAAAAAAAA
(1555 bp)

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