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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23821_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB2_[Bombyx_mori]
Ontology
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:22.46 TPM:11.68
ORF EntryO_BomoMSG12464_3prime_partial:A_BomoMSG_c23821_g1_i2
Sequence
(Nucleotide)
GCCTAGGAAAGGCGACGACGACGCATTTGCTTTAATATTTTCCAATTGAAAATACAGAAA
GGCCATTAATAGCCTACAGTATATTTTTTAAATACAACACTCGCTTTAGCGAAGATGTAT
GATACAGAAGATGATCAATACGAAGAGGAAGATGTGGAAATAACACCTGAGCTTTGGCAA
GAAGCTTGTTGGATTGTCATCAACGCTTATTTCGATGAAAAAGGTCTAGTGAGACAGCAA
TTAGATAGCTTCGATGAATTTATTCAAATGTCGGTACAACGTATAGTTGAAGATTCTCCA
CCCATAGAATTACAAGCAGAAGCACAACATTTCTCTGGTGAGATGGAAACACCACCAAAA
TATCGTCTTAAATTTGACCAAATTTATTTATCTAAACCTACTCATTGGGAGAAAGATGGA
GCTCCATCTCCCATGATGCCCAATGAAGCACGTCTTCGTAATTTAACATATTCGGCACCT
TTATATGTTGATATTACAAAAACAATAGAGAAAGAACATGAGGATCCTATTGAAACGCAA
CATCAGAAAACATTTATTGGCAAGATTCCTATTATGCTTAGATCTACATATTGCTTACTA
AACAGTTTGACTGACCGTGACTTGTCAGAATTGAATGAATGCCCCTTAGATCCTGGTGGT
TACTTCATTATTAATGGATCAGAAAAAGTACTAATTGCACAGGAAAAAATGGCTACCAAT
ACTGTCTATGTATTCAGCATGAAGGATGGCAAATATGCTTACAAAACAGAAATAAGATCA
TGTCTGGAACATAGTTCTAGACCGACATCTACATTATGGGTTAATATGATGGCTCGAGGA
GGACAAAATATAAAGAAATCTGCTATTGGTCAAAGAATTATGGCAATTGTCCCATATATC
AAACAAGACATACCTATAATGATTGTATTCAGAGCTTTAGGTTTTGTTGCTGATAGAGAT
ATATTGGAACACATTATATATGATTTTGATGATCCAGAAATGATGGAAATGGTTAAGCCA
TCTCTTGATGAGGCTTTTGTCATTCAAGAACAAAATGTAGCACTCAATTTTATTGGAAGC
CGAGGAGCACGCCCAGGTGTCACCAAAGAAAGACGTATTAAATATGCTAGAGAAATCTTA
CAAAAGGAAATGTTGCCACATGTTGGAGTATCAGATTTTTGTGAAACAAAAAAAGCTTAT
TTTCTAGGCTACATGGTACACAGATTATTATTAGCTGCTTTGGGTCGAAGAGAACTGGAT
GATAGAGATCATTATGGCAACAAAAGATTAGATTTAGCAGGACCACTTTTGGCTTTTCTA
TTTAGAGGCTTATTCAAAAATTTACTAAAAGAAGTCCGAATGTATGCTCAAAAATTTATT
GATAGAGGAAAAGATTTCAACTTGGAACTTGCTATCAAAACAAAAATCATCACTGATGGT
CTTCGTTATTCTTTGGCAACTGGTAATTGGGGTGACCAAAAGAAAGCTCATCAGGCCCGA
GCTGGAGTATCTCAAGTGTTGAACAGATTAACTTTTGCATCTACTTTATCCCATTTAAGA
CGTGTCAATTCTCCAATTGGACGTGATGGTAAACTTGCTAAACCACGTCAATTGCACAAT
ACTTTATGGGGTATGATTTGTCCTGCTGAAACTCCAGAGGGAGCTGCTGTTGGCTTAGTG
AAGAATTTAGCATTAATGGCTTATATCTCAGTAGGAAGTCAACCTTCACCAATTTTGGAG
TTCTTGGAAGAATGGTCAATGGAAAACTTGGAAGAAATTGCACCATCAGCTATAGCTGAT
GCCACAAAGATATTTGTGAATGGTTGTTGGGTAGGAATACACAGGGACCCTGAACAGTTG
ATGGCTACACTACGTAAACTAAGACGTCATATGGACATCATTGTCTCTGAAGTCAGTATG
ATTAGAGATATAAGAGACAGAGAAATCAGAATCTATACAGATGCAGGTAGAATTTGTAGG
CCATTACTTATTGTCAATAATGGTGTCTTATTGTTGAAAAAGAAGCACATAGATGATTTA
AAAGAAAAGGACTACAATAACTATGGTTGGCAAAATTTGGTGGCTAGTGGAGTAGTTGAA
TATATTGATACTTTGGAAGAAGAAACTGTGATGATTGCCATGAGTTTAGATGACTTGAAT
CAAGTTAAAGAATATGCATATTGTACTACTTATACACATTGTGAGATTCATCCTGCAATG
ATTCTGGGTGTCTGTGCGTCTATTATTCCATTCCCAGATCATAATCAAAGTCCCAGAAAT
ACTTATCAAAGTGCTATGGGTAAACAAGCTATGGGAGTTTATATCACAAATTTCCATGTT
AGAATGGATACACTGGCTCATGTTTTGTATTATCCTCACAAACCCCTGGTTACGACAAGA
TCTATGGAATACTTACGATTTAGAGAATTGCCAGCAGGAATTAACTCCATTGTTGCTATT
CTTTGTTATACCGGATATAACCAAGAAGATAGTGTTATTTTGAATGCATCTGCTGTAGAG
AGAGGATTCTTTAGATCCGTATTTTACCGTTCATACAAAGATTCTGAATCTAAAAGAAAT
GGAGAACAAGAAGAACAGTTTGAAAAACCAACCAGACAGACATGTCAGGGTATGAGGAAT
GCTCTGTATGACAAATTAGATGATGATGGTATTATTGCTCCTGGTATTAGAGTATCAGGT
GATGATGTTGTCATAGGAAAAACTATAACTTTGCCAGAAAATGATGATGAGTTGGAAGGT
ACAACAAAACGATTTACAAAGCGAGATGCATCCACTTTCTTACGTAATAGTGAAACTGGA
ATTGTTGACCAAGTAATGTTAACATTAAATAGCGAAGGTTATAAATTTTGTAAAATTCGA
GTCAGATCTGTACGCATCCCGCAAATTGGAGATAAGTTTGCTTCACGACATGGTCAAAAA
GGAACATGTGGAATTCAATACAGGCAAGAAGATATGCCATTTACTTGCGAAGGTATAACA
CCAGATATCATTATTAATCCTCACGCTATCCCTTCACGTATGACAATTGGTCACTTGATT
GAGTGTATTCAAGGGAAAGTATCTTCTAATAAGGGAGAGATCGGTGATGCAACCCCATTC
AATGATGCTGTAAATGTGCAAAAAATATCATCTCTGTTACAAGATTATGGTTACCATCTA
CGTGGTAATGAAGTCATGTACAATGGGCATACAGGCCGTAAAATTAATGCGCAAGTTTTT
TTGGGACCAACTTACTACCAACGTTTAAAGCACATGGTCGATGATAAAATTCATTCTAGA
GCTAGAGGTCCAGTACAAATTCTAGTGAGACAGCCTATGGAAGGTAGGGCAAGAGATGGT
GGATTACGTTTTGGTGAAATGGAACGTGATTGTCAGATTGCACACGGAGCTGCCCAATTT
TTACGTGAACGTTTATTTGAAGTATCAGATCCTTACCGTATACACGTGTGTAATTTCTGC
GGCCTGATCGCTATAGCTAATTTGCGTAACAATACATTTGAATGCAAAGGCTGCAAAAAC
AAAACTCAAATTTCGCAAATCCGTTTACCATATGCAGCCAAGTTACTATTCCAGGAACTA
ATGTCGATGAATATCGCTCCTAGAGATCGGA
(3631 bp)

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