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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23751_g1_i3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		acinus_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:31.29 TPM:16.28
ORF EntryO_BomoMSG12353_complete:A_BomoMSG_c23751_g1_i3
Sequence
(Nucleotide)
GGTGGGTTTCTTGTAAATTGTCGTGTGCTCTTTATGTGTTATTGTGAATTCGTGCTATTG
TAAACAGTGAATTTTGTAGACGAAAGCGTGAGGATGCGTCGGAAAAGTGAGCGTACCGCC
AGTAAGAAGGCAAAGGCCTCTCCTGAAGTAAAAGTTGAAAAAGCAAAGAAAACAAGAACG
CGACGTAGAAAACAATCTTCTTCATCAGAAAATGATTCTCCAGATGAAGCAAGTCCAGTG
CGTGTAGCTGTACCCGTGGCGGAAGAGGAACGTAAACCACCACAAACTCCCGCCAAAGGG
GAAAATGTGGACGAGTCTCCGGATCAAGTTTGGCAGGTTAAAACTGCTGAGGGATCAGGT
GATGGTGGAGAAATACAAAAACTCAAAATTTGCTTAACACGTCCGCCATCTACACCAGAA
CGTGCTGAAAGATCGCCGCGTCAAAAAAGGAAACACTCGCGAGCTACTAGTTCTAGTGAT
AACCCTAGTGATACATCGGAAGAAAAGAAAAAAAATAAACACCGTTCTAAAAGATCTTTT
CGAGATAAAGATGGCACTGACAAAAATCAAGACAGCCAAGAAGAAGACCAAGACGCTGAA
AATGAAGATAAAGAGAAAAGTGATCATGAAGTATCTCAAAGTGAAACAGAGGCCAAAGTA
GAGACTTCTGTGTCTACAACAAATAAAGAAAATAAATCAATTGAAGAATCATCCGAAGAT
GCTTCAAGCAGTATAAAATCTAGTAATGTCGTAGAAATTTGTGCTTCTGTACAGGACGAT
CCTGTTGCTGATACAACTGTTGGATCACCCAGACCTGAAACAAATGCTTCACTCAAACTT
GACTCAGTATCAGCTGCGGCCGCTGAAACAACTGAAGTAAACAATGAAAATACTGATGAA
TCCATAAATGATGAAAAAACAGAGATAACAAATGAAGACAAAACTGTTGAAACAACAAAT
GCTGAGTCTGTTACTGAAAATAATGAATCAACATTAGATACCTTAAAGGATGAAACTGTT
TTAATTGAAAAGGAGGAAACAACTGTTGTAACTACCAAAGACACATCTCAAACAGAGATA
AATGAAACTGAATCCAATGACAATAAGTCAACCAGCAGGGAAAGAAGTGATTCTGTTGAT
AAATCAGAGGTATTAGAATTACATCCAGAAGAATCAAAAATGGAAATACAAGATGTGGAG
ATAAGTAAATCAAAGGATATTGAAACCAGTGAGGAATTAGAAGTAACTGTGGATCATAAT
GCTGAGGTAAGTATTAAAAAGGGACAAACAGACAGCAATGAACCAGAGACAAACACTGGA
AATGCAAAAGTTATTAATGAATCTGATGTTGTAGAGAAATCCAGAAAAACTTCAACAGAT
TCTGGACAAAGCAATGAAGTGACCAAATGCAATAATGGGAAATATTCATCAAACAATAAT
AGCAGCAATAGGAAAGATCTAGGACAGTCAGATGAAACAACAACATCTCAAAGTGAAATT
GTACCAAATGGTCAAATTGTTCCAATTGTTGTAAATAGGAAAAGAAAATGGGGATCTAGA
CCAAGTAAACTAACAACACAGAAGTCAATCACTATATCAACTGATGTGTTGAAGGATATC
ATACCAAATGTTAAACCTGTTGAATTTGATGAAGTTATTGAAGAGAAGAAACATAAAAGA
ATAGAAGTTAAAGAGAAAATTGATCGGCCTGTCTTGCCCAAAATTGTTATAGATAATTCA
GAAAATGTTGAACAAAAGAAAAAAGATGAAAGAAAAGAGAATGACAAAGACAAAGAAAAC
GTTAAACTAAAGGAAATTAACTCCAATAGAAAAATATCGATTATCAAAGAAAAAGACAGT
ATAATTGCAAGACCGCCCAGTCCACCAAGGCACAAACAGTCAAATATACTCTTTATCACC
AATTTAGTCAGGCCATTTACACTATTGCAACTCAAAAACTTACTGCAAAGAACTGGCAGG
ATAGAGGAAAATGGGTTTTGGATAGATAAAATAAAATCTAAATGCTATGTGAAATATGAA
ACTGAAGATCAAGCTGTTGAAACAAGACATGCCTTGCATGGGGTGACATGGCCTGTATCA
AATCCAAAGACTTTACATGTGGACTTTTCAACAACAGAAGCATTTGACAAAGCATTATCC
AGTGAGGAAGCAGAGAGTGCTCCACCTTCGGCAATTCCAGGAACAGTTGAGGATTGGCTT
CGGGAGCAAGATCTGAAAAGAGAGGCAGAAGTGGAAAAGTCATGGGAGCGTAAAGGAACT
ATGAGGGAGTGGGATGTAGGCAAAAATGATAAAGACAAAGAGAGAGACAAGTTGCGACGT
GAAGAGCGTCCATCTGAGAAAAGACGACATCGGACCCCAGAAAGGAGCCCCGAACCAGCG
AGAAAATTCAAAAAGAAAGAAGAAGAGGCTCCTGCAAAATTACTTGATGATTTATTTAGA
AAAACAAAAACAACTCCATGTATTTACTGGTTGCCACTGTCTGCTGAAACGATTGCAATA
AAGGAAGAGCAACGTCGCCAGCACATGGCCGAGTATGAACGTCGCTTACTAGAGCAACGT
CGGCCGCCGCCCCACCGACGTCATTAGCATGGTCCGTCCTGCATACATTCATTGAACATT
TACATAATCACACCACTTATCAAACATAACACTCACACATTTCATATTAAAACACAGTGA
CACTTCACAAGCTCATACTCATCTAATATAACTGTCGATCTTCGACATTTTTCTTTCAGG
TAGCATTTTCTTAAGAAGTACTTTTTTAATTACTGTGTTAACTAATAATAGCATATGAAT
TAGGTTCAAGTGCACAGGAAACTCGAATGGATTTTAAATTGTAAAAAAAAGATATCAGTC
ATCGTCTGAATTTATTTTATACACAATGTTATAGAAAGGCAAGCTTGGAGGGAAAGCTAT
GATTTAATTCGTCGGAGTACCGCGGTCACTAACACGATGCCGGGGGATATGAAGCTCGGC
TCTGAGGATGTGCGCGGGTCCTACGCTGACTTGATGATTGTCACAACGAGATATTGGCGA
TACTTGTAGACGTCTTGGGACGTTGTCGATTAGTTGTTGCTAAGCAAAGTTGAACTGACT
TGCTGGAATTTTATGACCGGCGATAAATGTGCGAGCGATAAATGTGACGAGAATGGAGCC
GTAATTAAAAATGCTCAAGTCAATAAGTCTATCGTGAACTAGTTAAACGAGGGCGCCGTT
TACAGTATATTTCCAGAGAAACAAAAGAATACAGGAGGCATGTTTGATGTCTGTCTAATG
ATTAGTCTAGAAAGCTGCTCACTTGGTGGAACGCTGATCGTCATGGTTTAATCGGAAGAC
GTTGAATGTTTCCTACGAATCACGCAGCTATGTGAAAATGTGTTAGATCCTTCTGTCATA
TAAATTCTGTTCTGTCCAATTATATATTCCAGTCACTGTATGTTGAATAAATACTTTTCA
AACAAAAAAAAAAA
(3494 bp)

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