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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23744_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016597 F amino acid binding
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0019233 P sensory perception of pain
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:6.70 TPM:3.49
ORF EntryO_BomoMSG12345_internal:A_BomoMSG_c23744_g1_i1
Sequence
(Nucleotide)
TGGGGGCAAGCACAATGACTTGGATTTAGTTGGAACTGATAGTCATCATCACACATTCTT
TGAGATGTTGGGCAATTGGTCCTTTGGTGACTACTATAAGAAAGAGGCATGTCAAATGGC
ATGGGATCTGCTGCTCGGTCCCTATCGCTTGAAGCCTGATGATTTGGTTGTCACATACTT
TGCCGGTGATCCTACCATGAAACTGAATGAGGATAGAGAATGCAGAGATATATGGAAGTC
CCTTGGAGTGTCTCCGAGTCGTATAAAAGGTCTTGGAGCTTCAGATAATTTCTGGGAGAT
GGGATTGACTGGGCCTTGCGGTCCATGTACTGAAATACATGTTGTCAACCCTGACGGAAG
CCTGACCGAAATCTGGAATTTGGTGTTTATACAGTTTAATAGGGAAACAGATGGTTCAGT
TACCTCTCTGTCTCGTCATCACGTGGATACTGGCATGGGATTAGAAAGAATGGCGAAGTT
GCTGCAAGGCGTACCCTCTAATTACGACACAGATATTTTCAAACCTCTCATCAAGGCGAT
CGAGAAGAACAGCAAAAATGTACCAGCTTATAGTGGTCAGTACACGGAGAGTTCAACATT
GGACTGTGCTTACAGGCGGCTCGCTGACCACTCGAGGATGATCAGTGTCTGTTTAGCTGA
CGGTGTCTTCCCTGCCAACAGCTTAAATGTAAAGCAAATAATGCGTAAATCGTTCAAAAT
ATGCTCTGATGTCTTCAACAACCCTCACCTGCTGTCGAATTTATATGATGAAGTTGCAGC
GACCTTGGGCTCTACCTATCCAGAGCTAGTGAGCAACAAGTCGAGTGCGAAACTTATTAT
TGAGCACGAAGCCCAGGCCTATGCGAAGATGAGAGCTGGTCTGGTGAAGAAGTGGAAGGA
CCTGGTGATGAGGTACCCCGAGGTTGAAAGCCTCAATGATGTCGAGACACCTGGATTCGC
TTTAGGATATAAGGAGTTCAAAGAGACTGTTTCAAAACTTAACACATCTATAATACCCGG
AGAATTGATATTCAAACTTTACGATACTCACGGCTTGCAAGAGGAACTAATAAATAGAAT
AGCAGAATTAAACAACATGACCACAGACAAGGAGGGCTTCCAACAACTTCTGTCAAAGCA
CAAACACAGACACGAGATCG
(1160 bp)

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