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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23725_g1_i3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		mRNA-decapping_enzyme_1B_isoform_X1_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0042802 F identical protein binding
GO:0043085 P positive regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:1903608 P protein localization to cytoplasmic stress granule
Transcript
Level		FPKM:2.84 TPM:1.48
ORF EntryO_BomoMSG12305_complete:A_BomoMSG_c23725_g1_i3
Sequence
(Nucleotide)
CTGTGATGCTTGTTCGCTGATCAAAACTATTTTATTATTAGTAATATAAAAAATGGCTGA
CACCGGGTTACGTAGTATGAATTTCGCTGCATTAAAGCGGGCAGATCCATATGCTCGTGA
AATTGTCGATAGTGCTACCCACGTTGCCCTTTACACATTTGAAGAGAACGAATGGGAGAA
AACCAACATTGAGGGTGCTTTGTTTGTGTACAGTAGAAATGGTGAACCATACCACAGTTT
AGTGATTATGAACAGGCTGAACACTAACAACCTAATAGAACCAGTGTCTAAAGGAATTGA
ACTACAGTTAAAGGAGCCGTTTTTACTATATCGTAACGCCAAGTGCCGCATTTACGGTAT
ATGGTTTTATGATAAGGACGAGTGCGTGCGAGTGGCCACGAAGTTGAACACATTAGTGAA
AGAGTCCATAAAACAGTCGCAAGGCGAAACCATGCCACAGAATTCAGTTTACAATTCGTC
TACAACTTCAACTCAATCTATAGATATCTTCAGCATGTTGAGTAAAGCGCAAGACGATTT
CAATTCTAATAAAGGTGTTGCTGGAAACAAATCCGAATCGACGCCGGCCAAAGCGCCTGA
CATGACGTCGCAAAGTGTAATGGATTTCTTTGCAAAGGCTGGGAGTGGAGCATCGGCTCA
AATGCCTGCAGTGTCTTCATTGCCCTCACCAGGGATATTCGGTCCGCGTGCCACTGATTC
CAGAGAAGTACCACAGCTTTTACAGAGGCTCATGAGTAACCCTGCACATTCAGTAGAACA
TATTGAGAAGCAACAGCGATCTGTTACTCCTCAAGAAGGGCAAAGCTCAAATGGTAATTC
TACACTAGATTCTGGTATCAAACCAAATTGTATGTTCTCATTAAAGTCAACTCCTTTGGA
GAAGCAAAATCAAAGGATACCAGGATTGAAAAAAGCTCTGGATAGTAGTGATGCTAATGG
AATAGTCACCATGGAGAATGAACTCAATTTGATGCACTTATCTTCTCCCAAGACAACATC
GCCATTAGCTGCATACTTGAATCAATCTCAAGACATAGGACACACGGTAAGTTCTTATTA
TGGTAGCAAAGTGGAGGATGTTGGACATTCTTATCCTAAGATTGACTCTGTAACTACTCA
GCAGAAACCGGCGCTGATGCCCCCCACAATGTTCACTGCAAGTTCAGGTGGTGATGTCCA
GCCATCACCGCAGCCACTCACCAGGAATCAACTCCTTCAGGCCTTTAATTACTTACTCAA
ACATGATGCAGATTTTGTGAATAAACTTCACGAAGCCTATGTCAAATCGTTTTCAGAAAA
AGCATTTTCTGTGTCATAAGATAATCTTTTATGACTGTGGCTGATGTTGCCAGCCATTAT
TATGATGTACAGTTGTAATATGAAGCATAATCTCTTTAAAAATGTTGTGTAGAACTTGTT
GTTTTTTAGTGACTTACCATTTGGACAGAGTATTTTAAATAAGTTTAAAAATATGCAAAC
CAGTTGTCACTTAATTTTATATAGTGGATGAATTTTAGTGACTCCAGATGAGTGATATTC
AGTCAGGTCTTTAATGACACAAATGTTTGTGATATTTTTAGTTACAAGCTAATTGGCTTC
AGCTTGATGTTCTGTAAAATCAAACTCATCCAACATCCAGTTACTGTTCTTACACATCCA
TCATACTTTTAATGTTCTTCTTATCACAAAAAAACGGACAG
(1721 bp)

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