SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23701_g1_i4
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		WASH_complex_subunit_4_isoform_X1_[Bombyx_mori]
Ontology
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
Transcript
Level		FPKM:4.67 TPM:2.43
ORF EntryO_BomoMSG12271_5prime_partial:A_BomoMSG_c23701_g1_i4
Sequence
(Nucleotide)
CTCTTCCGATCTTTCACATCTTCAACTTGATGTAATCAATCCATTTACTTTTGAAATGGT
AAAAAAATTGCTTCTAGCAATTAATACTTTTAGAGTTCAGTACATTTACATGTGTGTTGT
GCCATCAGTTGAACACTATCTTTCAACAATGTTCTACAACCTAACTACCGTTGTATTATC
AGATTGGAAAACTTATGGTGAAATGAGACAAATGGCGAGACTAAAATTCAATTTAAAAAC
GGTTCAAGATAATCTCCCAACTCAGACTCTGGAGCAGGGCCTAGATATACTAGAGATTAT
GCGCAACATTCATATATTCGTTTCGAAGTATCTTTACAATCTAAACAATCAAATATTTAT
TGAAAGAAGCAGCAACAATAAACACTTGAGCTCAATTAACATTCGACATGTCGCCAATTC
TATACGGACTCATGGTACTGGGATAATGAACACAACAGTGAATTTTACATACCAGTTTCT
AAAAAAGAAGTTCTTTACATTTTCTCAGTTCATGTATGATGAACATATAAAATCCAGGTT
AATTAAAGATCTTAGAATCTTCAAAGAAACCACTGATGGAAACTACAGCTACATGTATCC
ATTTAAAAATGCAGAAAGATTTAACAAGGGTATAAAGGTGTTGGGACTTTCAGAGGATGG
ACAGAGTTACTTAGATCTGTTTCGAGATCTTATTAGTCAAATTGGAAACGCCATGGGATA
TGTTAGGATGATTAGGTCAGGCGGCCGACATTGCTGTTCGGATGCGACTGTTTTCCTGCC
AAATCTGGAAGATGTTGTTAATTTCAAAGAACTATGCCAAAAAGAGGCTCTTGGGCCCCA
GACTGTTCAATCAGCGGAAATTCTAGATCAGAACACAAACGACCTTATTTCCAACTTTAT
TCAAGGAACTGAATATTTCAAGCTGCTGGTAGACGTGTTCTCACCCGTTTTCCGAAATCC
TAAGAATGTTCATTTGAAGAATTTTTATATTATTGTTCCTCCATTGACACTTAATTTTGT
GGAACATCTAATCTTGTCGAAAGATAAAATGTCGAAAAAGAATAAAATAGGAGCTGCTTT
TACTGATGATGGTTTTGCTATGGGAATTGCTTACATACTGAAATTACTAGATCAGGATTC
TAATTTTGAATCTCTACACTGGTTTGAATCAGTATGGAAACACATTGATGACGAAAGAAA
GTTACTAGAAGAACAGAAAAACAAAGGAACCATTCAATTACAACAAGCCTTAGCATTGAC
CGAGAAGAAAATAAAAACATTAGAAGAAGAGTACAAACTCCTCTATTACAGTCTTACAAG
TGCCAGAATATTTTTTCGTTAAATTATTTAAAGTCGGCGATGAGTGTTGAAGTCTACTCT
ATTTAAACTATTAATAGGCATATGCTGGGTTAAGTCCGGACGAAATCGTAAGCACTATAG
CTGAG
(1445 bp)

- SilkBase 1999-2023 -