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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23689_g1_i3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		protein_lap1_[Helicoverpa_armigera]
Ontology
GO:0005102 F signaling receptor binding
GO:0005176 F ErbB-2 class receptor binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006605 P protein targeting
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016323 C basolateral plasma membrane
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0031965 C nuclear membrane
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032495 P response to muramyl dipeptide
GO:0032496 P response to lipopolysaccharide
GO:0038128 P ERBB2 signaling pathway
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045175 P basal protein localization
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0070433 P negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway
GO:0071356 P cellular response to tumor necrosis factor
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
Transcript
Level		FPKM:2.93 TPM:1.52
ORF EntryO_BomoMSG12234_internal:A_BomoMSG_c23689_g1_i3
Sequence
(Nucleotide)
CCTCCAGATATTGGTCATTTGACTTCTTTAAGAGTTTTGAATTTAGTGAGGAACTCCCTC
ACATGTCTTCCTCAGTCATTATTAAATTGTGATAATTTGGTGGCTCTTTGGCTCTCTGAA
AATCAAAATAAACCCTTAGTGCCTATGCATTCTGAAGTAGATCCTCGCACATATGAACAA
GTGCTGACTTGTTTTCTTTTCCCTCAAGTGCCTTTAGCTCCTATTGAAATCAAATCAGAT
AATGGGAAATCAGAAAATGTTGATAATAATACTTCAGTTCGCCACATTAGCTTTGAAGAC
ATGAAAGCAGCACCAAAAGTGCCTGAAAAACCGGGGCAGCTAAGAAGAGCACCAACACCA
TATCCAAAAGAATTGAGAGCTTTGGCAAAACATGCTAGAAACATACATAAAGATGGCTCC
CAAGATGTATCCCCTTCAATGCAAGATGCAGTATATATTAAAGCAGCCAAAATTACACCT
ACTCTACAACAAAGATTTGCATCTGATAATAAAATAGAACAAGAGTCAAGCAAAGATCAC
ACTGATGGAATAAACAATGAAGCTATGAAAACATCAGTTTATGATAACCTTTCCTCTGAA
AACACATATGATAAGCCACTAGATCTTGCACATGAACAAGGCACCACATACAAAAGTGTA
GATCATGCTTTATATCCTGAAAATAATGAAACCAGTCAAAGCAAATATAAAAATGAAAGT
TCAGAGACTTATGATTTAACACAGACGCAGTATTGTAAACAGCATGGTGATAAATATTCT
GCAAGGCAAGAAATTGATAGATCACACGCACCAACACCGCAGAATGTTTATAGTGGTTAT
GTGGGATACAGTAACTATCAAAATTCGAAGGAGAACAGTTATGGAAATAATTTAGAAGAA
AGCCAGACACATTTGCAAAGACTCAGTGTGAGTTCTCATGGCAGAAGTAGTCAAAATGAA
ACTATACTTTTACCTTCACATTTCAGTGAACATTCATATAATCCCAGACCGCCCATCAAT
AATGTTCCTAATTTTAATCCTATTTACTCCAGGAAAGATCATATATGTCACCCTGTTCAT
GATCATGGTTTTCATGAAAATGTTTATCAAACAGAAGGTCATACGCACACCAAAGATAAA
TCATATAATACAAGAAATTATGATACTTACAGCTATCATTCACACAGTAGCCGAGATCTA
CCAAGTCCTAGAGTACATACTGTGAGTCAAGTAGTGAGCTCTACTACAATGCCAAATTTA
AATAACTACAGCAATAATTATCCAAATGCAGTAGATAGACATGCATACCAGCCACCTATG
CATCAGACACCAACTCCAAATGCAAATATTTATATACCAGTTGGTAGTCCAACTTATGTA
GCATCACAATCACCTGAACTTTATTCACCCACAGGCCATACAAACGAAACAAATCCGTAC
CGCATGACTAACACTCCACTTGTATCTGATGATGGTAGCTACAGCCAAATCCATGCTACT
TCTAGTCAAAATATGTATGAAATATATGATGCCATGCCAGCTCCTAATCCACCTAACGTG
ATAGGACACAGACAGAGTCCCAGTAATATATCGGAGACGATGTATAGCAGGCAGCCACCT
CCATATCATATTGCAGCACCATTCACAAAACATGCCCAGT
(1660 bp)

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