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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23482_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]
Ontology
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.37 TPM:0.71
ORF EntryO_BomoMSG11856_complete:A_BomoMSG_c23482_g1_i1
Sequence
(Nucleotide)
CTTCCGAGCGACGAGACGGCCGCCATGTGCGTAGATGCGTGAGCGCAGCGCGCCGCACCG
CGACCCACAGAGAGGCGCAGCTCGCGGCGACGCACGGACCATGCCGTGCTGCCTCTGGGC
CGCGCTGTCTCTGCTCCTCGCGGTCGTCGGCGCCGGCGCCTGGACACCGCCGAGACAGCC
CTTGCTGCTCACTCCGAGACATCGCAGACACGCGCAAGAAACTCATCACTTGCGACTCCT
CGGTTGGGATCTCAAGTTAAAAGAAAACAAAGCTATTCGTTCGCCTTATTATAAGGAATG
TCAGTTTTTTACGGGACGCGTTCTTCATGAAGAGGGCTCCGCTGTGACGGTTACCGAATG
TGACGGACAGCTGTACGGGCTGCTGCAGGTCGGCGGTGAAGAGTTCGTGCTGCAGCCGAC
CAGAACGCAGGAGAAACACGTGTTACGACGCCGAGACGTTACGCACAGCGAGCGTTCGGC
CGAGTACAACCTCACCGGTGATACGGTCATCGACCTTGATCTTGACTTCGATGAAGATGA
TGACCTGTTACCGACCTCGCACGTACATCCGCGGCACAGCGATCATTCCGACAAAGAGTA
CTTCCATGACATGCATTTGTTCAGAAGACCTGCGTCAGGTGTAAAGGGTCTTTGGCTTGA
ACTGGCCATCGTTGCCGACAACACCATGTTGAAATTTCATGGCCGAGAACGTGTCAAACA
TTATATTTTAGCTTTAATGAATATTGTCAGTGCCATCTTCAATGACCCATCACTGGGCTC
TAACATCACGTTAGTGATCAACAAATTGTTTCTCTACGAGGACAAGGACATAATTTTGAA
GTACGGCAACATCAAAAAATCGTTAGAAGCTATTAACAAGTGGAACTATAGACATCTCAT
GAAGCTACCTGAAGGTAGCACAGGATGGGACGCCACAATATGGTTGACGAGATCCCAGCT
TGGAGGGCCTTCCGGGTTCGCCCCCGTAGGTGGGGTCTGCACCAAAACGCGGTCAGCCGC
CATCGACCGCGACGAAGGATTGACCAGTGCTTTTGTAATTGCACACGAACTCGCTCACTT
ATTAGGGTTGACCCACGATGGAGAAGGCAATTGTCAGTCTGAAGCGCTTCGAGGCTCTGT
AATGGCACCGACAGTATTGGCTACCCTACACAACTTTGCCTGGTCAAGTTGTTCAAAGGA
ACAATTTCATGCGAAATCAAAGAAGTGGTGGTGCCTCCATGAGCGTAGCACTGACGAGGG
TGTGGAACTAGGTGGTGCTAAGGAGCTCTCAAATTATGTCTTCACAATGGATGAACAGTG
CAGGACTGAATTCGGAGAAGGTTTCTCAGTGTGTCGATCCGTAAAGGTTCGGTCTGCGTG
CTCAAGGTTGTGGTGTGCCCACCGCGCTATGCCTCACGTGTGCCGGTCAAAGCGAGCGCC
GCCTCTCGAGGGAACACCCTGTGGACAAAACCAATGGTGCGTGGATCGTGTCTGCGAGCC
GATGCCTGGCCACAGTAAAGAGACTAAGGTTGAAAACAAACATACTCCAGAATGGGGAGA
TTGGGAGGAGTGGAGCGCATGCAACGCAGATTGTGGTTACGGCCTCAGGACAAGAACACG
AAAATGCAAATACAGAGGGTTTGTATCAGAGAGCGCATGTGAGGGTGCTGGATCTCAAGT
AGCGACTTGCTGGGCGGGGTCTTCGTGCGCTGCAACCAGAGACATCCGCTCCGACCTCTG
CCATCGCCAACAGAGCAGACTCATACCTTATTTACATGCCAACGAGTCCAACCATTGTGA
AATTTCGTGTGTGGACTACGCTGGAGGGTCGCCCACCAATTTCGGAGCCCTACCCGACGG
AACGCCCTGCAGCTACCTTCGACCCTTCGACGTTTGCTTCCAGGGTACGTGCGTGAAAGG
TCAATGCAATTCATCAGATACAACCTGCAACTGGTGCCCAGACGGCTACTGCAACAACAA
CACTAACACATACACAAGATTACTCGGTAACGGCTGGACTCGCATGACGATGGTGCCGCA
CGAAGCACGTCAACTGTCCATACACATAGCCACACCGATTCCCCTCCACATTGCACTGCG
CGAACGGAAACGGGACAAGCCGATTCTAGAACTTTCTAAGCACTCCAAAAAATTCGACAT
CAGCTCCCTTCAGGACAACTACTTGAAATACGATCCGAGCGTGCCTCAGAATCTTCAGAT
CGTGGAAATGGACAGCAACATTTTAGACTTGAAAGAGAGCTTTCGTTATGAAGGCGAGGC
GATCACGGCTGGGACTCTCCTGCGCTGGAATCAAACCGACACGGACATTTATATAACGTC
AGAATCTAGACTGCAAACTGATTTGATGATAATGGCAATACCAGTTAATCCTACATTAGA
AGATGCGGTCAGTGTGGACGTGTCAGTAAACTACAGCACTCCAACTGGACGCACGAGACC
ATTGGAATACAGCTGTGAATTTGTGTGGGCTTCTGACGATTGGGAAGAATGCAGTTCGAC
ATGCGGTAGCAACGGTGTTCAAGAAAGACAATTGTTCTGTGTTCCATCAAACGCAAGCAT
GTTATCGAGGAGAGAGTTTATCAAACACAGCGTGTCACCAGTCATGTGCTCGTCGTCAAA
GCCGCCACATCGCCAGCCCTGCAACCGTATCCCCTGCCCTGTTTACTGGAGGGAGCAACC
CTGGACTCCTTGCTCGGCGTCGTGCGGACGCGGCGTGTCCCGGCGTCCGCTCACGTGTCC
GGCGTCAGACGAGCTACTATGCGGACCGAAGCCGCGCGAGCGACGCCGGCGCTGCAGACT
CCGGCGCTGCCCCTCAGCATTGAGAGTCGCAGTGCAGTGCCCCGAACGCGACCACGCGCA
CTACTGCGAGCTCTTCACACTGGAACAGCTGCACCGGAACTGCGAGGTGCCGCCGTTCAG
GAAATATTGCTGTAACGCTTGCAGGGACGCAGACCGCCGTCAGCACAGACGGTACGGCTG
AGAAGCGTCGCTTCTGTCCAACTTAATGGTAGAAACTGCGTTTTTATCAAACTTCTGGGA
CTACGCTGAACCGAGAAACCGAACCGGTTATAATGTAGGTTCGTAAACTTCGTAATATGC
TAGAATGTTTTTAAAAGATTTTACGATGCAACCTATCTTCTTAAGGTCCACATTATTGAA
TAAATTATAATAAACATAACTCTAAAACTGTACATTATGCAAAATTTATTCGTACACAAA
CATGATGTCATAGTATTCTTATATCTTTTAAAGGTCATAGTCAATATACTGAGGCCCATA
GTTTCAAAGCGTTATTTCTATCCTCTTCTTAAGGTAGCGTTTGGAACTAAACGATTACTT
AAAAAAATAGTATGGTTTATTTTGATAACCACAACTGTGTATTACTACTACAATTTTTCA
AATAATAATTAACCAACTGGATTTTATTGTTCATTTTTGATAAAAAAAAACTTATTCGAG
TATTTTCAAACGTTGCCTTAAACAATGGTCTCTTGTTATTTAGTTAAAAATAAAAGATTC
CATGTCAGCATAACCGGT
(3558 bp)

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