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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23480_g1_i2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		elongin-B_isoform_X1_[Bombyx_mori]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016567 P protein ubiquitination
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070449 C elongin complex
Transcript
Level		FPKM:30.37 TPM:15.80
ORF EntryO_BomoMSG11853_complete:A_BomoMSG_c23480_g1_i2
Sequence
(Nucleotide)
CTGAAATGGAAGTCTGAAGTTGTAGTTTTCGATAATTTCATTTCGTACGCCTTGTAGCAT
TTTCTTTTATACATAAAGGATATTGTCCTTAACAAAATAACATAATGGATGTCTTTTTAA
TGATAAGGCGAAAAAAGCTTACTGTCTTCACTGATGCGAAGGAAACCACTACAGTATTAG
AGTTGAAGAAAATGATTGAAGGTATCCTAAAGGTACCTCCTCCAAGTCAAATGCTGTTCA
ACAAGGACAGCCAGCTCATGGAAGATGAGAAGACCTTGGCTGAATTTGGCCTGACCTCTA
ACACAGCAAAGGCTCACTGTCCAGCACCAATTGGATTAGCTTTGAGGAAGGAGAATGGTG
AATTTGAGGCACTGGAACTTACCCCGTATTCTTCACCCCCCGACTTGCCAGATGTTATGA
AATCTCAAGAGACCAATGGACAGGAACAGATGGATCAACATTAAACGAAAAACGAGGCTG
TGATTCGGACGTAGACGATACAGACACCAACTTTGTATCATAACGATTTTGTATATTTAA
AAAAAAACCAGTTCAGGATCTGAACATTTAGCCCGGCCCTTACGATCCGGCAGTCGGGTA
CAAAACATTAAACAATTTTATTTTTTATTCACGATAAAATATTTTGTTATTAATATATCG
ATTTGTGTTCCGTTCAACGTTTTGTTACGCTTCGATTTAAATATTCCTTCTACTGTTTCA
ACAAATATATATATATATATATATAAATACATGATGCATAGAACTCTACCTCCATTATTA
TTTGGCCTTTCAAAATTGGCTTATTAATTCATTTGATAGCACTCGTGGTATTAACATGTA
AACAGACCTGGTTTTGTCTGTTCATATGTAACGTGTCAGAGGCGACCCCAGAGTGACCAG
AGTTCAATGTGTTCCCAATCTTTTATTGAGTCATTGTGTTCACCATTGGCAACATTATAT
GTTTACGCCGGGACAAAGTAAGTTACATTGTGTAATAGAAAGATTTAATTAATTCAGGAA
GTATAAGTTTAGTTAAGAGTCCACAATTCGACTGTTTGCGCATAGACAATAGTAGGAACT
TTTTTTCTTTTTTGTAATTAGTTTCCGGATCCGTAGACGTAATGTCTGACGTCCTAAAGC
CACATTAATAGCATTTAAAATCGATTTACAAACATAAAATAGTAATAAATATTCAAAAAT
GCTTTATGTCAGACAAGAACAAGTTTTGACTATATGTAACGGTATTATCAGTAACAAAAA
GTGTAGTTTTGTAAACTAAGTCATAAAGGCTGTGTGGAATATGACTAAAATAACTACTTT
ATCGTAACATTATATAAATTGGAAACAATTGGATATTCACGTTATGTTGCTTCTATCATT
TAAGATTTAAATCTACAGCGATGTCTCAGGTAGGGTAGTTAAAAAAAACCATTGTAGAAA
TATAAAAAATTAAGCATTGGTATTAATTACTCATCGAAAAACATTTGTATCATAAACATA
TTTATTTGAAGTGAGCGAAGTTTGGGCAGTATTGTAACAACTCGCTTAACACGCATGGAT
TATATTATAATAATTGCTTAGTTTGTTAATAAGCCGTATATTACGTTTTTACTAATTTCA
CATAACACCATCTGCAAACGAAAAGAAATTCAAAATAATTTAATAAAACGGTAAATAAAA
TAAAGCGGTAGGCAGCGGCTTGGCTC
(1706 bp)

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