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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23477_g1_i3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		RNA_pseudouridylate_synthase_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
Transcript
Level		FPKM:0.35 TPM:0.18
ORF EntryO_BomoMSG11848_complete:A_BomoMSG_c23477_g1_i3
Sequence
(Nucleotide)
GTGACGTAAACAAATTCTTTTGTTCCTTCTGTCAGTTGGTGTCTTAAATTTTGATGTGTA
CTTTTATTATGTGAATAAAAATAATAAAAATAAGATATCCAGTGGACAAAATGCCATTGG
AGGAAGTGATCTGCGTTTATTTGGACCGTGCTTTGCAGACCACAATTCAATTATTCCTAT
CGCATTATTGTCCACGGATATCCAACTATTTACTTCAAGTGCCGTCTCTAAGAAAATTAA
ATACAATAAAACTCAGATGTTTTTCGCTTCTGGATAAATAAATTAGAGAAAAATCATCAA
AAATGAACGCACCTAATTTCAATTTTCGCGGGTTCAGAATGTCAACAAAGAACATGGCTG
TGGAAATTCTATTTGAAAACTCTGATTATTTAATCGTGAACAAGCCTTATGACATGTATA
TCAATTCTGATGACGAAAACGAAAAGAACACAGTGGCTTACCAAATAGCGCGTTGCGATT
CTCATCTGTCAACGTCATCGCAACCTTTACATTTCGTCCAACGATTGGACTACGCCACGA
GTGGCGTGCTCTGCATGGCCAAGAGTCGGCCAGCTGCGGCCAGCGCTGGCAAAGCGTTCG
AAAAGAGATTGACCAGGAAATACTACCTGGCGATCGTCCGCGGACATGTTGGCTTTGAGC
TGGCCGATGTTGATTATGGCGTTGGCGCAGACCCTGAAACCCTGCACTCGAATCACAAGA
TGCTGGCGCGAACATCTTCATCTCAAACGATACAAGTTCGCAGCGCTCAGACCAGGATGC
TGCTCTTGGAGACGGGCTGGTACCAACGGAGTCCTGTGTCTGTACTCCTACTGAAGCCTA
TAACTGGTTTGTCTCTGGGGTCTCTCAAAAAGCTGGGTCGTCGCCATCAGCTGAGGGTCC
ACTGTAACGCAATAGGCCACACTATACTGGGCGATTACACTTACAGCGACAGGTCGGACT
GTTCTCCACACCGCATGTTTCTCCACGCTTCCAGGCTAGTTTTACCAGTCGACAAGGAAG
TTATCGACGTTCAAACCAAAACCCCTTACTTTTCCGATGAAGGCTTCCTCCAGCACTGGA
AGTCTGATCGGGTAGCGTACCCTTACAAAACCAAAGGCGACTTCAATGATGTATGTGACG
TGATCGATAAGTCATATGTGCTGGGCGTCAACTATAAAATGTATAATTGCACCAATTAAA
TTATTTCTATCTTAAAAAAAAAAAAA
(1226 bp)

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