SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23417_g1_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		hypothetical_protein_KGM_206265_[Danaus_plexippus_plexippus]
Ontology
GO:0001164 F RNA polymerase I core promoter sequence-specific DNA binding
GO:0001187 F RNA polymerase I core promoter sequence-specific DNA binding
GO:0001189 P RNA polymerase I preinitiation complex assembly
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005668 C RNA polymerase transcription factor SL1 complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070860 C RNA polymerase I core factor complex
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
Transcript
Level		FPKM:5.88 TPM:3.06
ORF EntryO_BomoMSG11719_3prime_partial:A_BomoMSG_c23417_g1_i1
Sequence
(Nucleotide)
TTACATTTCGTGAGAAAAATAAGAGACATCATAACTATGTGAAATTTAAATTTATTTTAT
TGCTGAAGAACGTACAGTTATAATATAATTCTCAGCAGGAGCAGAGTAATAAATACAAAA
ATGAATTCACATAATTCGTGTGAAGTGTGTGGAAATAAAGACATGGCCTTAATCGATGGT
TTTTATTACTGTGTGGAATGTGGTACACAGGACACGAATGTACGAGAAACAGTCGTTGAA
AAAAGCATATTCGCTGATGGAACGACTGCGTATAGCACACGAAAAAAAATCTTAAAAATT
AGTGAAGATAAAGTTGAAATGACTGGAGAATGGTACAAGTGGCATATATATAACTTTATC
CTGTGTGGCTTAGCTGATGAACTTATAGAGCTCGGAGCGAAACCAAGCTTCAAAATGAAA
CTACTATGGGTATGGTCGAACTACATCAGGAAATATCAAATAAAGGATGACCTCGGATTA
ACATGTAATATAAATGAAGAGATGCAATCAAAGTTACCAGGAAAAAGCAAAAGCGTTGAA
AAAATTCCTTCTGAAAACGATGCAGAGGATAGATCCAATGGAAATAGCGGCTTAGCCACA
AAGTACGTATCGCGCCAACGAGACATTCGGGCCATAACTTGTGGCTTACTTGTATCTATG
CTGTATACAGCACTAAACCTAGACAAGAGTGAATTACAGACGTCACATTTATTTCGCTAT
ATCAAGGAGGGCAGACTTGATATAACTGATTTCAGTAGGCACATCCCTGACGACATCAAT
ACCAAATTAATACCTGACTGGCCATACTTTGTCAGGAGTTGCAGCCCAAGGAGACTGTTA
AGCTCAATCAAATGTAGGTGGATGACTATGGCCTTATTAAATCAATTAGAGATAGGTCCA
CCGGTCTTGCCAGATATGAGGAAC
(924 bp)

- SilkBase 1999-2023 -