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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23404_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_3_[Bombyx_mori]
Ontology
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.20 TPM:2.18
ORF EntryO_BomoMSG11703_5prime_partial:A_BomoMSG_c23404_g1_i1
Sequence
(Nucleotide)
CGACAGGAGATGAATGATGTTGTAATGGCTGAAGAACTCCGTAAGGTGTTGATAAATCTC
AATACTGGTGGTTGCGGTTCGAAAGGTGCTATTTCACCGGAGTGCTTGTTCCTTGTGATT
TGGAAGGTGGTACCGAGGTTTAGGGGCTATCAGCAGCAGGACGCACATGAGTTTCTCAGA
TACATGCTAGACAGATTACACACGGAGCTGTTGCAACTGCTGCCCCCCGAGAAGCCGGAG
CCCGGGTTCGTGGCGCGGCCTCCGTCGGCGTCCATCGTCACCGCTGTGTTCGGGGGAACA
TTGCAGAGCGAGGTTCGTTGCTTGGCGTGCGGCACGGAAAGCAAGAAGTACGACCCTTTC
TTAGATCTCTCACTGGAATTACCAGAAGTCGGAAGAAATGATACGCCCGTCGCTCTTTCG
GATTGTCTCGCCAGCTTTGTACAGGTCGAGGAGTTGGCCGACACGGAGCGTTACTTCTGC
AGCAGCTGCAAATGTAAGCAGAAGTCCACTAAGCAGTTCTGGATTCGGAGGTTGCCGAAC
GTTTTGTGTCTACATTTGAAAAGGTTTCGGTGGCACAATTATTTCAGGACCAAGGTGGAC
ACTTCGATCTCGTTCCCGCTGCGCGCGCTGGACGTGTCCCGCTTCGTGCGCGACGTGCGG
CGCGCCGAGCACGACGCGCTGCTGTACGACCTCGCCGCCGTCATCGTGCACCACGGCTCC
GGGGCCGGGTCTGGTCACTACACCGCGTTCGCTATAAACGAGGAGCAGTGGTTCCACTTC
AACGACCACACGGTGCGCGCCGCGGACTCGCACGCCGTCGCCAGCTGCAAGCCCTACATA
CTCTTCTACATCCGCAGGGAACTGTCGCTGTGACACCGATACCGACCTCAATACTCACAA
TTTTGACCCTCGTACACTCAGATTAGTCTGTAATGGTGTAATCAAGAAGGGTGTAATTAA
AATCGGGACCTGAGATACAAATGGCTGACTCTAAGTGAATGGAGTGACAGAGAAGGGACA
AGACGAAAAAAAGTTTGGGAATCTATGTTCAAAGGTCATTGCCCCTGTAATAATTAAGAT
TGTAAAAACACTGTATGATACAAGTGTTGCCAACTTTTATTTTTTACAGCGCGCTCAAAG
ATCGTTACAAGTAGCTTAAAATATATAAAATAAAATGGCTGTTAGGTATGTATGTATGCT
CCCGTG
(1206 bp)

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