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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23391_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_dbp2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:23.61 TPM:12.28
ORF EntryO_BomoMSG11656_complete:A_BomoMSG_c23391_g1_i2
Sequence
(Nucleotide)
CCGAGAACTAACATGGCGCTCGTTTGGCTTTGGCATCAGTTGTGCTATGTCTGCGACTGT
GTTTATCAATAATTGCTTAATTTAAACGTAATATAATTGCAACCAAAGTACCTACTCTAA
ATAGTAAATTGAGAGTGGTAGTTAAACTACTTCATATAAGCTAGCATCATGTATGACGAT
AGACGTGGTGGCCGTGGTGGAAGAGGTGGGAGTCGCGGAGGGCGAGGATCCAGCCGCGGT
GGTCGGGGTAGCGACAGGTCGCAAGAGCGCGGACCTAGTCGATTTAGCGGAGGTCGTGGT
CGGGACGGTGGACGCGGCGGTAGGGATGGCGGCCGTGGAGGACGAGACAGCGGCAGGGGT
TTTGGGAGAATGGGGAATCGGGATGATCGCTCCAATTTCAAAAATGATCAGCCTGGCGGT
AACCTTCGAAAAATTCACTGGGACACCGTAACGCTCACACCATTCCAGAAAAATTTCTAT
GTCCCTCATCCGAATGTTCAACGTCGAACTCAAAGCGAAATTGAGGCCTATCGTAGCCAA
CATCAGATAACTGTGAAAGGTCGAGACGTGCCTGCCCCTAGCATATTTTTTGAAGAGGGT
GGTTTCCCTGACTATGCTATGAAAGAGATTTTAAAACAAGGTTTCCCGAACCCCACTCCT
ATTCAAGCACAGGGCTGGCCAATAGCTCTCTCTGGCCGTGACATGGTGGGCATAGCCCAA
ACTGGGTCAGGCAAAACCTTGGCATACATTTTACCAGCCATAGTACACATAATTAATCAA
CCGCGTCTGCTAAGAGATGATGGTCCAATAGTCCTTGTGTTGGCTCCAACAAGAGAGTTA
GCCCAACAAATACAGCAGGTTGCCAATGAATTTGGTCAAAGTATCCACGTGCGGAACACT
TGTATCTTTGGTGGTGCTCCAAAGGGACCACAGGGCAGATGTCTTGAGAGGGGAGTGGAA
ATTGTTATTGCTACTCCTGGTAGACTCATTGATTTTTTGGAGAAGGAGACAACGAACCTG
CGCCGATGCACTTATTTGGTGCTGGATGAGGCTGATAGAATGTTGGACATGGGCTTCGAG
CCTCAGATCAGGAAGATTATTGAACAGATTAGACCTGATAGACAAGTATTGATGTGGTCA
GCTACGTGGCCCCGAGAAGTACAGAATCTAGCTGAAGAGTTCCTGCATGACTACATCCAG
ATCAACATTGGTTCTCTCGAGCTCTCGGCCAACCACAACATCCTCCAGATTGTTGATGTT
TGTGAGGAATGGGAGAAGAATGATAAATTGATTACATTGCTTACTGAGATATCTTCAGAG
GAGGAAACCAAAACTATTATATTTGCTGAAACCAAAAGGAGGGTTGACGACATATGTAAG
GCGATAAACCGTGCCGGCTGGCGCGCCCTCGCCATCCACGGGGACAAGAACCAGCAGGAC
CGCGACTACGTGCTGAATCAGTTCCGCCACCACGCCGCCGCCATACTGGTCGCCACCGAC
GTCGCAGCCAGGGGACTCGATGTGGAAGATGTGAAGTTTGTGATAAACTATGACTATCCA
AATAATTCTGAGGATTACGTGCATCGTATCGGCAGGACGGGACGGTCCCAAAACACCGGC
ACGGCCTACACACTCTTCACTCCTAATAATTCAGCAAAGGCTAGAGACTTGATGTCAGTA
CTTCAGGAAGCCAATCAAGTTGTGAATCCGAAACTACTAGAGTTGGCGCAATGTGGCATG
GGATTCAAAGGAAAATTCGGTCGTTCAAGATACCGAGATGACGGCGGCAGGGGACGCGAT
GGAGGCTCACGCGGGGGACGCGGGAGTCGGGGTGGGGGCCGTGGTGGCTACGGCGACAGA
GGTTCACGCTGGGACAACAGTAATGACAACCAAAACTCCTACAACGACTACAACAGGCAG
AGTTTCGGCAATAGAGAGGGCGGATACCGCGGCAGGGGCCGGGGGAGGGGGGGACACGAC
GCGCCACAGACCTACTACAACATGTACTCACAACCGCCGCCCGCTCACTAGCCAGTACGC
CGCGTAGTTATACAGGTCGAACTGATATATAGGAAAGAGGTCGACAGATAATACAGATTA
TTCACACAACATTGAATCTTCAAGATGTCCTTACTTATTAATTTCTTTCATTAATGGAAC
ATTTAACTATTAAATAATGTCAAAACAATACATTACATTTAATATCTAATTAACACATAG
TATGTCTACATAATCAACATCTATCTTGCACTTTTGCATTTGATGTAGCGACCAGTATAT
GTTGGAAACATTGGAGAAGTAGGCACTGATTAACAATTAGAGTAATTCTATTTTTTTATA
TTTTTATATAATCTGAGCTGGTACACGCCAGTTAAGATTATAATTTCAAAATATTGTTTT
TGCTTTGGCTGCGGTATAAAAAATACGTTTTATAAATTTGATGAATACCTAGTTAGCCTA
GTTAAGGTTTTAAAAATTCAAAATATAAGTTAAGTACATTATAATTTGGATTGCAGTCAC
TACATCTAATTGTGCGAATAATATGTATACATATATAAATTATC
(2564 bp)

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