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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23351_g1_i3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:14.05 TPM:7.31
ORF EntryO_BomoMSG11585_complete:A_BomoMSG_c23351_g1_i3
Sequence
(Nucleotide)
CGCCGCGCCCCCCGCCCCCGCAGCCGTTCTCCATCGCGGGCTTCGACGGCTACGCAATCG
TCATGACCATCGTATTCTGTATCTTCTCGACGCTGTTCCTCACGGGCGTCTTCTGTTGCA
ATCAAACCGAAAACCTCGTTGAGTGCGGCCCCGAGACGAGCCCGCTGCACGAGCGCCGCG
CCAGTACGTACCCGCCCCTACTGCATACGCACGGTGTGTCTTCAGACAACAATCAAGAGA
TGGGAACAAACGCGTCGGGCACGCGCTGGACCATGGAGGCCACCGATGGCGACGAGACAG
ACGCGACGTTCCTCGAGAAGCTCGGTGCTGCGACGGAATCCAAAATTGAAGACTTCTTCC
AGTGGTGGGGCTGCGTCATGGCCTCCTCGCCTTGGCTGGTCCTCTTCTCTGGTTTGTGCG
TTGTGGTGATCCTCGGCTCCGGCATCACGTACATGCAGGTGACCACCGACCCCGTGGAGC
TGTGGGCCTCGCCCACCTCGCGCTCCAGGGTCGAGAGGCAGCGGTTCGATTCCTACTTCG
AACCTTTCTACAGGACAGAAATGTTAATAATCAGCTCGAAAGGTCTGCCCGAGATCGAAC
ACGCGAACCTGACTTTCGGGCCTGTGTTCAACGCCACCTTCATGCTGGACGTGTTCGACC
TGCAGTCCAAGATCTTAGAGCTCGGCAACGAGTCCGGGATCCAGAACATTTGCTACGCGC
CGCTGTCGTCGCCCTTCCGCGGCCCCGTCACCAGCAAGGACTGCGTGCTGCAGAGCGTGT
GGGGCTGGTGGCAGAACGACAAGTCCGAGTTCTCCTACGAGGACAACGAACACCTGGACA
AGATCCTGCAGTGCTCCAGCAACCCGATCTCGGTGGACTGCCTGTCGTCGTACGGCGGGC
CCGTCCTGCCCGGCGTGGCGCTGGGCGGCTTCCTGCCGCGCGGCGACCAGCTCTCTGCCC
ACGCGCCCTACCACCGCGCGCAGGCACTCATCCTCACCTTTCTCGTCAACAACAAGCAGG
ACAAGTCCCAGCTGAAACAAGCACTGGAGTGGGAGAAGACGTTCATTGCGTTCATGAAGA
ACTACACGGAGAAGGCGATGCCGGGCTACATGGACATCGCGTACACGTCGGAGCGCTCCA
TCGAGGACGAGCTGGACCGCGAGTCCAAGTCGGACGTGTACACCATCCTCGTGTCCTACT
TCATCATGTTCGCGTACATCGCCATCGCGCTCGGCCGCTTCACCACCTTCTCGCGGCTGC
TCATCGACAGCAAGATCACGCTCGGGCTCGGCGGTGTGGTTATCGTGTTGGCGTCTGTGG
TGTGCTCCATGGGCATCTTCGGGTTCTATGGAGTGGCGGCCACGCTTATCATCGTGGAGG
TCATCCCGTTCCTGGTGCTGGCCGTCGGCGTCGACAACATCTTCATCCTGGTGCAGACCC
ACCAGCGCGAGCCGCGCCGCCCCGACGAGACCGTCGAGCAACACATCGGTAGAATGCTCG
GCAAGGTGGGCCCGTCGATGTTCGTGACGTCGGTGTCGGAGTCGGTGTGCTTCTTCCTGG
GGGCGCTGAGCGACATGCCGGCCGTGCGCGCCTTCGCGCTGTACGCCGCCGTGGCGCTGC
TCGTGGACTTCCTGCTGCAGGTCACCTGCTTCGTGGCGCTGCTGGCGCTGGACACGCGCC
GACAACTCGACAACAGGTTCGATATATTCTGCTGTCTGCGGGGCACCAAAACAGACCTGG
CAGAACAAGGTGAAGGAGCATTGTACAACCTGTTTCAACATTTCTATGTACCTTTCCTGA
TGAAGAGGGAAGTCAGAGCCTCAGTCATGATTATATTCTTTGCTTGGCTCTGCTCGTCTG
TTGCTGTAGCGCCTCACATCGACATCGGACTAGACCAAGAGCTGTCTATGCCCCACGACA
GTTTCCAGTTGAAGTACTTCCAGCATCTGAACCGCTACCTGAACATCGGTCCGCCGGTCT
ACTTTGTGCTCACGGACGCCGAGACGGACGCCAAGCTGAACTACTCCACCCCCGACGTGC
AGAACTTGCTGTGCGGCTCGAGGTTCTGTAGACCCGACAGTCTCGCCATGCAGATATACG
CTGCGTCCCGCAGCCCGGCCGACACGTACATCGCGGCTCCAGCCAACTCTTGGCTCGACG
ACTTCTTCGACTGGTCTGTCTCACCGGAGTGCTGCTTCTACTTCCAGTCCAACAACAGCT
TCTGTCCCAGCGACACTCAACCCGACGATTGTGCCGCTTGCAACATAAAGTTGGTGCAGC
CGGAAGAGCGTCCCAGCCCGCAGGACTTCAGCACGTACCTGCCGTACTTCCTGCAGGACA
ACCCGTCGAGCCGCTGCGTCAAGGGAGGCCACGCGGCCTACTCGCACGCCGTCAACCTGC
GCTCGCACAGCCAGAACACCACCGGGATCGGCGCCACCTACTACCAGAGCTACCACACGG
TCCTGCGCAGCAGCTCGGACTACTACGGCAGCCTGCGGGCGGCGCGCGCGCTGGCGGGCT
CGCTCACGGAGACGCTCAACGCGCACCTCCGCGACCTGGGACACTCCGCCACCGTCAACG
TCTTCCCCTACTCGGTCTTCTACGTCTTCTACGAGCAGTACCTCACCATGTGGTCCGACA
CCCTCAAGAGCATGGGCATCTCCGTGCTCTCCATATTCTTCGTCACCTTCGTGCTCATGG
GCTTCGATCTCTTCTCGGCTCTTGTAGTCGTAGTGACCATCACTATGATTGTTGTTAATC
TCGGCGGCCTCATGTACTGGTGGGGCATCAGTTTGAATGCAGTCTCGCTTGTAAATTTGG
TGATGGCGGTGGGCATATCGGTGGAGTTCTGCTCGCACCTGGTGCACTCGTTCAGCGTGT
CGGCGGGGCGCGGGCGCGGGGAGCGCGCGGCGGACGCGCTGCTGCGCATGGGCTCGTCCG
TGCTGTCCGGCATCACGCTCACCAAGTTCGGCGGCATCATCGTGCTCGCCACGGCCAAGA
GCCAGATCTTCCAGGTGTTCTACTTCCGGATGTACCTCGGGATTGTGCTGTTCGGTGCGG
CCCACGGACTCGTATTCCTGCCGGTTATGCTCAGCTATATCGGTTCGCCGGTTAACAAAC
AGAAGCTGGCCAACCAGAGGCGGCGCGGCAACGAGACGACGGTCGCCGAAAGTTCGCTCA
CACGAGTAAGACACGGCCACCCCACATATTACAGAGAGTACACGTTCGACTCGATACCCT
CGTGAGCTTGCACGGACGATGTTTAGCTGAGACGCGCGGAGGCTGCGTAAACGTAAGCTA
GGAAACTGTTTGTCTACTCTAAGTACTGTTTGTTATACGACATTATAATGGCAGAAAAAA
ATCTAGTTCACTCAGTCTGCCCATATAAGACGATAAGTAAATACATAAAATGTTTTATAT
ACATTTTTGGAAGAGCAAAAAAACTTTAAGTATTAACAAATCAAGACATTACAGTAATAG
TTAATTCGCATTAATTTCGTCACATTTAAGATCTAAGAACGTGTCTGTCCGTACGACTGC
TATAACAGATTTTAGATACAATAGATGTTTGACGCGCGGAAAGTATTTAGTGTCACTTGC
AAGCCGCCTCCGTCTCGTTTGAGTTCGTTTACCCGGCACGACAGCTTTGTGTTACATTGC
GCGCTATCCATGAATTAAAAAAAAAATCGAACGTCGAATGTTTTAGTGCTAGCTAACGTT
TACACGGGAGTATTTGATTGTACCCTAACAACCTAGGGAATTATATTTGCAAATAAAAAT
GCTCAGCTAAACATTGTATAATACAATTTCGTCACGCAAACAACGCGTCCATGTATGCTG
TACAATATTAAAACAAGTCGCATATTAAATGTTTCAATTAGTATTTTTCTATCCGTACGT
ACACAGTATTATTTTATTCCTGAGTGTTTTATTTTTAGAGAAATGCTACTTGAAATGCTA
CTTACTGTTACGGAGATCGGAAGAG
(3985 bp)

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