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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23351_g1_i1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:9.07 TPM:4.72
ORF EntryO_BomoMSG11579_complete:A_BomoMSG_c23351_g1_i1
Sequence
(Nucleotide)
CGCCGCGCCCCCCGCCCCCGCAGCCGTTCTCCATCGCGGGCTTCGACGGCTACGCAATCG
TCATGACCATCGTATTCTGTATCTTCTCGACGCTGTTCCTCACGGGCGTCTTCTGTTGCA
ATCAAACCGAAAACCTCGTTGGTGTGTCTTCAGACAACAATCAAGAGATGGGAACAAACG
CGTCGGGCACGCGCTGGACCATGGAGGCCACCGATGGCGACGAGACAGACGCGACGTTCC
TCGAGAAGCTCGGTGCTGCGACGGAATCCAAAATTGAAGACTTCTTCCAGTGGTGGGGCT
GCGTCATGGCCTCCTCGCCTTGGCTGGTCCTCTTCTCTGGTTTGTGCGTTGTGGTGATCC
TCGGCTCCGGCATCACGTACATGCAGGTGACCACCGACCCCGTGGAGCTGTGGGCCTCGC
CCACCTCGCGCTCCAGGGTCGAGAGGCAGCGGTTCGATTCCTACTTCGAACCTTTCTACA
GGACAGAAATGTTAATAATCAGCTCGAAAGGTCTGCCCGAGATCGAACACGCGAACCTGA
CTTTCGGGCCTGTGTTCAACGCCACCTTCATGCTGGACGTGTTCGACCTGCAGTCCAAGA
TCTTAGAGCTCGGCAACGAGTCCGGGATCCAGAACATTTGCTACGCGCCGCTGTCGTCGC
CCTTCCGCGGCCCCGTCACCAGCAAGGACTGCGTGCTGCAGAGCGTGTGGGGCTGGTGGC
AGAACGACAAGTCCGAGTTCTCCTACGAGGACAACGAACACCTGGACAAGATCCTGCAGT
GCTCCAGCAACCCGATCTCGGTGGACTGCCTGTCGTCGTACGGCGGGCCCGTCCTGCCCG
GCGTGGCGCTGGGCGGCTTCCTGCCGCGCGGCGACCAGCTCTCTGCCCACGCGCCCTACC
ACCGCGCGCAGGCACTCATCCTCACCTTTCTCGTCAACAACAAGCAGGACAAGTCCCAGC
TGAAACAAGCACTGGAGTGGGAGAAGACGTTCATTGCGTTCATGAAGAACTACACGGAGA
AGGCGATGCCGGGCTACATGGACATCGCGTACACGTCGGAGCGCTCCATCGAGGACGAGC
TGGACCGCGAGTCCAAGTCGGACGTGTACACCATCCTCGTGTCCTACTTCATCATGTTCG
CGTACATCGCCATCGCGCTCGGCCGCTTCACCACCTTCTCGCGGCTGCTCATCGACAGCA
AGATCACGCTCGGGCTCGGCGGTGTGGTTATCGTGTTGGCGTCTGTGGTGTGCTCCATGG
GCATCTTCGGGTTCTATGGAGTGGCGGCCACGCTTATCATCGTGGAGGTCATCCCGTTCC
TGGTGCTGGCCGTCGGCGTCGACAACATCTTCATCCTGGTGCAGACCCACCAGCGCGAGC
CGCGCCGCCCCGACGAGACCGTCGAGCAACACATCGGTAGAATGCTCGGCAAGGTGGGCC
CGTCGATGTTCGTGACGTCGGTGTCGGAGTCGGTGTGCTTCTTCCTGGGGGCGCTGAGCG
ACATGCCGGCCGTGCGCGCCTTCGCGCTGTACGCCGCCGTGGCGCTGCTCGTGGACTTCC
TGCTGCAGGTCACCTGCTTCGTGGCGCTGCTGGCGCTGGACACGCGCCGACAACTCGACA
ACAGGTTCGATATATTCTGCTGTCTGCGGGGCACCAAAACAGACCTGGCAGAACAAGGTG
AAGGAGCATTGTACAACCTGTTTCAACATTTCTATGTACCTTTCCTGATGAAGAGGGAAG
TCAGAGCCTCAGTCATGATTATATTCTTTGCTTGGCTCTGCTCGTCTGTTGCTGTAGCGC
CTCACATCGACATCGGACTAGACCAAGAGCTGTCTATGCCCCACGACAGTTTCCAGTTGA
AGTACTTCCAGCATCTGAACCGCTACCTGAACATCGGTCCGCCGGTCTACTTTGTGCTCA
CGGACGCCGAGACGGACGCCAAGCTGAACTACTCCACCCCCGACGTGCAGAACTTGCTGT
GCGGCTCGAGGTTCTGTAGACCCGACAGTCTCGCCATGCAGATATACGCTGCGTCCCGCA
GCCCGGCCGACACGTACATCGCGGCTCCAGCCAACTCTTGGCTCGACGACTTCTTCGACT
GGTCTGTCTCACCGGAGTGCTGCTTCTACTTCCAGTCCAACAACAGCTTCTGTCCCAGCG
ACACTCAACCCGACGATTGTGCCGCTTGCAACATAAAGTTGGTGCAGCCGGAAGAGCGTC
CCAGCCCGCAGGACTTCAGCACGTACCTGCCGTACTTCCTGCAGGACAACCCGTCGAGCC
GCTGCGTCAAGGGAGGCCACGCGGCCTACTCGCACGCCGTCAACCTGCGCTCGCACAGCC
AGAACACCACCGGGATCGGCGCCACCTACTACCAGAGCTACCACACGGTCCTGCGCAGCA
GCTCGGACTACTACGGCAGCCTGCGGGCGGCGCGCGCGCTGGCGGGCTCGCTCACGGAGA
CGCTCAACGCGCACCTCCGCGACCTGGGACACTCCGCCACCGTCAACGTCTTCCCCTACT
CGGTCTTCTACGTCTTCTACGAGCAGTACCTCACCATGTGGTCCGACACCCTCAAGAGCA
TGGGCATCTCCGTGCTCTCCATATTCTTCGTCACCTTCGTGCTCATGGGCTTCGATCTCT
TCTCGGCTCTTGTAGTCGTAGTGACCATCACTATGATTGTTGTTAATCTCGGCGGCCTCA
TGTACTGGTGGGGCATCAGTTTGAATGCAGTCTCGCTTGTAAATTTGGTGATGGCGGTGG
GCATATCGGTGGAGTTCTGCTCGCACCTGGTGCACTCGTTCAGCGTGTCGGCGGGGCGCG
GGCGCGGGGAGCGCGCGGCGGACGCGCTGCTGCGCATGGGCTCGTCCGTGCTGTCCGGCA
TCACGCTCACCAAGTTCGGCGGCATCATCGTGCTCGCCACGGCCAAGAGCCAGATCTTCC
AGGTGTTCTACTTCCGGATGTACCTCGGGATTGTGCTGTTCGGTGCGGCCCACGGACTCG
TATTCCTGCCGGTTATGCTCAGCTATATCGGTTCGCCGGTTAACAAACAGAAGCTGGCCA
ACCAGAGGCGGCGCGGCAACGAGACGACGGTCGCCGAAAGTTCGCTCACACGAGTAAGAC
ACGGCCACCCCACATATTACAGAGAGTACACGTTCGACTCGATACCCTCGTGAGCTTGCA
CGGACGATGTTTAGCTGAGACGCGCGGAGGCTGCGTAAACGTAAGCTAGGAAACTGTTTG
TCTACTCTAAGTACTGTTTGTTATACGACATTATAATGGCAGAAAAAAATCTAGTTCACT
CAGTCTGCCCATATAAGACGATAAGTAAATACATAAAATGTTTTATATACATTTTTGGAA
GAGCAAAAAAACTTTAAGTATTAACAAATCAAGACATTACAGTAATAGTTAATTCGCATT
AATTTCGTCACATTTAAGATCTAAGAACGTGTCTGTCCGTACGACTGCTATAACAGATTT
TAGATACAATAGATGTTTGACGCGCGGAAAGTATTTAGTGTCACTTGCAAGCCGCCTCCG
TCTCGTTTGAGTTCGTTTACCCGGCACGACAGCTTTGTGTTACATTGCGCGCTATCCATG
AATTAAAAAAAAAATCGAACGTCGAATGTTTTAGTGCTAGCTAACGTTTACACGGGAGTA
TTTGATTGTACCCTAACAACCTAGGGAATTATATTTGCAAATAAAAATGCTCAGCTAAAC
ATTGTATAATACAATTTCGTCACGCAAACAACGCGTCCATGTATGCTGTACAATATTAAA
ACAAGTCGCATATTAAATGTTTCAATTAGTATTTTTCTATCCGTACGTACACAGTATTAT
TTTATTCCTGAGTGTTTTATTTTTAGAGAAATGCTACTTGAAATGCTACTTACTGTTACG
GAGATCGGAAGAG
(3913 bp)

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