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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23338_g1_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		HIV_Tat-specific_factor_1_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:9.45 TPM:4.92
ORF EntryO_BomoMSG11558_3prime_partial:A_BomoMSG_c23338_g1_i2
Sequence
(Nucleotide)
CGATAACCCTTACGTTTACGTTTACCAGCACTATTTTGTAGATGCCAATTTGAAATCGGA
TGAAATGTGGATGAAATTAAAGATTTGACGTATGTTTATCTCTGTAGAAATCAAGTTTTG
TACCTGCAATACAGATAGCCATAATCATATGGTCATCATCAGGTGTTGAATATCATGTAA
TATTTCCAAACACTTAACTGTACACATTCTACATCTAAAGTTGTAACGTTCTAACGTAAT
AAATGCAAGAATGGCTAAACTAAATCCAAGAACGGGATTTGTGATCAAACTTTCCGAAGA
GACAGTTCAAAAGTTAGCGGAAGAGGAAAAAGAAACAAAAGAAAAATCTACATATAATCA
GATAGAGGATACTACATCGGTAGAAGATATTAATAATGACAAAATTCAAAATGTTCAAGA
TGTGAAAACAACATCACAAACTTTAGATGTACCTACTTCCGATTCCATAGAAAAATCTAC
TGTAGAAAGTACTCTGCAGAAAGAAAATTCATCACAAACTGAAAAAACAGTTCTGAACAT
AACTGATGATAAGGGTGAAAATGATAAGGATAATACACTTGAAGATAATGAAAAAACAAA
GAAACCCTCCAAATCTATTACTGATTCTAGTACTTGGGGTGAGTATGCATCATACATAAC
TTACAAAGATAATGAAGCTGTATATACTGACCCCTCATCAGGTCAAGCTTACACTTGGAA
TAAAACCAGCAATGCTTGGGATGCTAAAGGTGATGAAGCACCTGGTCGTGTTTACAGCTA
TGAAGATGACACTCATATATACACAGAGGCTGATGGTTCAAAATATTTTTGGGATGAAAC
CAAGAAGGCTTGGATACCAAAAGTTGATGATGACTTTTTAGCTTATTATCAAATGTCTTA
TGGATTTATTGAAAATAAGAAAGATGATGATGAGAAAGAGAAAGGTAGTGACAAGAAGAA
GGAGTTGCAAAAAGAAGCTATGGCTGTCAAAAGGAAAAGTGAACCGCAGTGGTTTGAACC
TACTGATGATAAAAACACCAAAGTTTATGTATCAAACTTACCTCTAGACATGACTGAACA
AGAATTTGTGGACTTAATGCAGAAGTGTGGTCTCGTTGAACGAGATCCAAGTAACCAAAA
AATGAAAGTTAAATTATACATGGACAAAGAACAAAATTGTTTCAAGGGTGATGCATTATG
TACTTATATAAAAATAGAATCCGTAGATTTAGCATTAAAATTGTTGGATGGCAGCGATTG
TAAAGGCAATACCATTAAAGTGGAAAGAGCTCAATTTCAACTAAAAGGGGAATACAATCC
TGCCCTCAAACCTAAGAAAAGAAGAAAAAAAGAGCTGGAAAAAATTAAAAAAATGAAAGA
AAAACTATTTGATTGGAGGCCAGAGAAGTTTATTGGTGAACGTTCTAAACACGAAAGAGT
AGTTATTGTTAAAAATTTATTCCACTCTAGTGATTTTGATAAAGAGGTTCAGCTTATTCT
GGACTATCAGCAAGATTTGAGGGAAGAATGTGGAAAATGTGGAGACGTTCGGAAAGTAGT
GCTCTATGATCGCCATCCTGAAGGAGTGGCACAGATAACTATGAAAGAGCCGGAACAAGC
TGATGCTGTTGTTCAGCTGATCAACGGAAGATGGTTTGGCAAAAGACAAATCACTGCAGA
GATATGGGATGGCAAAACTAAGTACAAAATTGCTGAAACTGATGCAGACATTAATCAGAG
GTTAGATAAATGGGGTAAATTTTTGGAAGAAAAAGAAGATGATAATAAGGTAATTAAATT
GCCTGTTGAAGAAAAAGACACAGATGAGCTTAAAGTTGAAGAGGTTTCTATTGAAAAAGA
AAATACTCAATACCTA
(1876 bp)

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