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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23338_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		HIV_Tat-specific_factor_1_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0019079 P viral genome replication
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0044822 F RNA binding
Transcript
Level		FPKM:8.46 TPM:4.40
ORF EntryO_BomoMSG11557_internal:A_BomoMSG_c23338_g1_i1
Sequence
(Nucleotide)
TGCTCTTCCGATCTGGAAAAGTGAACCGCAGTGGTTTGAACCTACTGATGATAAAAACAC
CAAAGTTTATGTATCAAACTTACCTCTAGACATGACTGAACAAGAATTTGTGGACTTAAT
GCAGAAGTGTGGTCTCGTTGAACGAGATCCAAGTAACCAAAAAATGAAAGTTAAATTATA
CATGGACAAAGAACAAAATTGTTTCAAGGGTGATGCATTATGTACTTATATAAAAATAGA
ATCCGTAGATTTAGCATTAAAATTGTTGGATGGCAGCGATTGTAAAGGCAATACCATTAA
AGTGGAAAGAGCTCAATTTCAACTAAAAGGGGAATACAATCCTGCCCTCAAACCTAAGAA
AAGAAGAAAAAAAGAGCTGGAAAAAATTAAAAAAATGAAAGAAAAACTATTTGATTGGAG
GCCAGAGAAGTTTATTGGTGAACGTTCTAAACACGAAAGAGTAGTTATTGTTAAAAATTT
ATTCCACTCTAGTGATTTTGATAAAGAGGTTCAGCTTATTCTGGACTATCAGCAAGATTT
GAGGGAAGAATGTGGAAAATGTGGAGACGTTCGGAAAGTAGTGCTCTATGATCGCCATCC
TGAAGGAGTGGCACAGATAACTATGAAAGAGCCGGAACAAGCTGATGCTGTTGTTCAGCT
GATCAACGGAAGATGGTTTGGCAAAAGACAAATCACTGCAGAGATATGGGATGGCAAAAC
TAAGTACAAAATTGCTGAAACTGATGCAGACATTAATCAGAGGTTAGATAAATGGGGTAA
ATTTTTGGAAGAAAAAGAAGATGATAATAAGGTAATTAAATTGCCTGTTGAAGAAAAAGA
CACAGATGAGCTTAAAGTTGAAGAGGTTTCTATTGAAAAAGAAAATACTCAATACCTA
(898 bp)

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