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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23232_g1_i1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0019899 F enzyme binding
GO:0035925 F mRNA 3'-UTR AU-rich region binding
Transcript
Level		FPKM:4.68 TPM:2.43
ORF EntryO_BomoMSG11321_5prime_partial:A_BomoMSG_c23232_g1_i1
Sequence
(Nucleotide)
CCGAAACCACTAGGTGGCTGTTTGATAATGGCCGTCAACTCATTGATATATTTAAATCAA
TCGGTTCCACCTTACGGCGTCTCACTGAACAGTGTTGCCACACACACCACAAATTTTCCC
CTGAGGATCCAGGAGGGCGTGTGCATGACGCTGGAGGGCGCGTGCGTGGCGCGGCTGTCG
GACGCCGTGTTCGCGGTGTCTCTGCGCGGCGGCCAGCTGTACGTTGTGGCGCTGCTGGCG
GACAGTGTGCGCTCCGTCAGAAGCTTCCACATCGACCGCGCCGCCGCCTCCGTGCTCACC
ACCTGCATGTGCGTTATAGAAGAGGACTTCCTTTTCCTGGGGTCGCGGCTCGGAAACTCG
CTGCTGCTGCGAGTTACCGAGCGAGAGAACCGGATGCTGTTCTCCGTTGACAAGCCCCTG
GAAGCGACGGTCGATCTGACCGTGGCCGAAACCGAACGAGAGCAGAGCAGAGAGAAGGAG
CAGCCCGACCCGGCCTCGAAGCGGCGGCGCATGGACACCATCAGCGACTGCGTGGCCTCC
AACGTCATCGAGATCAGCGACGGAGACGAGCTCGAGGTGTACGGCAGCGACATACGCACC
TCCACAAGACTCACCAGCTACGTGTTCGAGGTATGCGATTCGCTGTTAAACATATGTCCG
ATCGGCGACGTGTCTATGGGAGAGCCCCAGCTCCTCTCCGAGGAGTACAGCAGGCAGCAG
GAGAATCCTCTGGTAGAACTGGTGACCTGTAGTGGCAGGGGGAAGAACGGCGCCCTGACC
GTGCTGCAGAGGACGGTCAGACCTCAGCTGATTACTGCTTTCAATTTACCCGGCTGTATC
GACATGTGGTCGGTTTTCGGAGAGAGCGAAAGCACCAGAGAAAACGAAGGGACGCACGCG
TATTTGATACTGACGCAGGACGACTCCTCCATGGTTCTGCAAACTGGCCAAGAGATCAAC
GAGGTGGACAACTCTGGCTTCATGACGGGTTCGCCCACCATCTTCGCCGGAAACCTCGGG
AATAACAAATTCATGGTGCAGGTCACCACCACCACCATTCGACTCATCAAGGGCGGCGTG
CAGCTGCAGTCGATCCAGCTGGAGTGGACGGCGCAGTACGCGGCCGTCGCGGACCCCTAC
CTGTGCGTCACGTCCAGCTGCGGCCGCGCCATCGTGCTGGCCCTGAGAGAGATCAGGGGG
AAGGACGGGCAGCCGTCGGGTCGGCTGGCGCCCACGCG
(1238 bp)

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